Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq11767 203 1e-49
seq36537 116 1e-23
>seq11767
Length=83449
Score = 203 bits (224), Expect = 1e-49
Identities = 141/159 (89%), Gaps = 1/159 (1%)
Strand=Plus/Minus
Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117
||||||| | |||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 37243 CCTCCCCCGG-CGGGATGGGGTAATTTGTGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 37185
Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177
||||||||||||||||||||||||||||||||| ||||||||| |||||| | ||||||
Sbjct 37184 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATG 37125
Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216
|||||| | ||| |||||||||||||||||||||
Sbjct 37124 GTAGGCACAGACAGTACAATCGAAAGTTGATAGGGCAGA 37086
>seq36537
Length=3820
Score = 116 bits (128), Expect = 1e-23
Identities = 125/164 (76%), Gaps = 5/164 (3%)
Strand=Plus/Minus
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA----AGGTACTATCAAAT 399
|||||||||||||||||||||||||| | | |||| || ||| | |||
Sbjct 480 GCATGTATTAGCTCTAGAATTACCACAGCTTTCCAAAGAGCGGGAGAGGAGGGACAAAAG 421
Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAG 459
||| || ||||||||| | ||||||| | |||||||||||| | ||||||
Sbjct 420 GAACCATTACTGATTTACTAAGCCATTTGGAGTTTCACTGTACCACCCATGTTTACTTAA 361
Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503
||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 360 ACATGCATGGCTTAAGCTTTGAGACAAGCATATG-CTACTGGCA 318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1509592071936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |