Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20 2014-06-25] 53,491 sequences; 1,127,622,302 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq6482 86.0 3e-11 >seq6482 Length=5893 Score = 86.0 bits (94), Expect = 3e-11 Identities = 102/137 (74%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 |||||| || | ||| | |||||||| ||||||||||||| ||| ||||| | ||||| Sbjct 3625 CTCCTTCAGGCGGGGGACACCCAGGGTGACGTTCTTGGCCGAGACCCCGGCGTAATGGAA 3684 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | |||||||| ||| ||| || || || | ||||| |||| || || || Sbjct 3685 GGTGTTGAGGGTCATCTGGGTGGCTGGTTCTCCCAGCGACTGGGCCGCCAGCGCCCCCAC 3744 Query 349204 CATCTCGCC-GGGCGCG 349219 |||||| || ||| ||| Sbjct 3745 CATCTCCCCAGGGTGCG 3761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2083275568452818