Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq42637 309 1e-81
seq28277 107 6e-21
seq28268 107 6e-21
seq26880 98.7 3e-18
seq19617 98.7 3e-18
seq45531 95.1 4e-17
seq43752 91.5 5e-16
seq36101 89.7 2e-15
seq42248 86.0 2e-14
seq10641 80.6 9e-13
seq3579 77.0 1e-11
>seq42637
Length=248
Score = 309 bits (342), Expect = 1e-81
Identities = 177/181 (98%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 281 CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTG 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTG 122
Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400
|||||||||||||| || ||||| |||||||||||||||||||||| |||||||||||||
Sbjct 121 GCTGTGGTTTCGCTGGACAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCG 62
Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 2
Query 461 G 461
|
Sbjct 1 G 1
>seq28277
Length=14843
Score = 107 bits (118), Expect = 6e-21
Identities = 88/107 (82%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| |||| || |||| |||| | ||||||||||||||||||| |
Sbjct 8187 CTTCTGCTCCACGGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 8246
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||| ||| ||||||||| ||||||||||||||| | ||||
Sbjct 8247 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCGCTGTC 8293
Score = 102 bits (112), Expect = 3e-19
Identities = 82/99 (83%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| | |||| |||| || |||| |||| | ||||||||||||||||||| |
Sbjct 7868 CTTCTGCTCCATGGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 7927
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105
||| |||| ||| ||||||||| |||||||||||||||
Sbjct 7928 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTG 7966
>seq28268
Length=7351
Score = 107 bits (118), Expect = 6e-21
Identities = 88/107 (82%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| ||||||| |||| || |||| |||| | ||||||||||||||||||| |
Sbjct 902 CTTCTGCTCCACAGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 961
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||| ||| ||| ||||| ||||||||||||||| | ||||
Sbjct 962 CTTTGACAGGTGTACCGGCCCAGTCAAACTCCCCACCTGCCGCTGTC 1008
>seq26880
Length=136732
Score = 98.7 bits (108), Expect = 3e-18
Identities = 81/99 (82%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| |||| | |||| |||| | ||||||||||||||||||| |
Sbjct 96043 CTTCTGCTCCACGGGAGGTTTCCATCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 96102
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105
||| |||| ||| | ||||||| |||||||||||||||
Sbjct 96103 CTTTGACAGGTGTACGGCCCCAGTCAAACTCCCCACCTG 96141
>seq19617
Length=1999
Score = 98.7 bits (108), Expect = 3e-18
Identities = 62/67 (93%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 381 CTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 440
|| ||| |||||||||||| |||||||||||||||||||||| |||||||| ||||||||
Sbjct 1406 CTTGTTCATCCATTCATGCACGTCACTAATTAGATGACGAGGTATTTGGCTGCCTTAAGA 1347
Query 441 GAGTCAT 447
|||||||
Sbjct 1346 GAGTCAT 1340
>seq45531
Length=225038
Score = 95.1 bits (104), Expect = 4e-17
Identities = 75/90 (83%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| ||||||| |||| || |||| |||| | ||||||||||||||||||| |
Sbjct 97576 CTTCTGCTCCACAGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 97517
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACT 96
||| |||| ||| ||||||||| ||||||
Sbjct 97516 CTTTGACAGGTGTACCGCCCCAGTCAAACT 97487
>seq43752
Length=13041
Score = 91.5 bits (100), Expect = 5e-16
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| | |||| |||| | |||| |||| | ||||||||||||||||||| |
Sbjct 7437 CTTCTGCTCCATGGGAGGTTTCCATCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTAGG 7496
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCA 114
||| |||| || ||||||| | ||||||||||||||| | |||||
Sbjct 7497 CTTTGACAGGTGCACCGCCCCTGTCAAACTCCCCACCTGCCGCTGTCA 7544
>seq36101
Length=26490
Score = 89.7 bits (98), Expect = 2e-15
Identities = 72/87 (83%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| ||||||| |||| || |||| |||| | ||||||||||||||||||| |
Sbjct 7744 CTTCTGCTCCACAGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 7685
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAA 93
||| |||| ||| ||||||||| |||
Sbjct 7684 CTTTGACAGGTGTACCGCCCCAGTCAA 7658
>seq42248
Length=41348
Score = 86.0 bits (94), Expect = 2e-14
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| |||| | |||| |||| | ||||||||||||||||||| |
Sbjct 8492 CTTCTGCTCCACGGGAGGTTTCCATCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 8433
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACT 96
||| |||| ||| ||||||||| ||||||
Sbjct 8432 CTTTGACAGGTGTACCGCCCCAGTCAAACT 8403
>seq10641
Length=99604
Score = 80.6 bits (88), Expect = 9e-13
Identities = 75/94 (80%), Gaps = 1/94 (1%)
Strand=Plus/Minus
Query 13 CTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAA 72
||| ||||||| || || | |||| |||| | |||||||| | |||| ||| | || |
Sbjct 1583 CTCCACAGGAGGTT-CTATCCTCCCTGAGCTCACCTTAGGAGATCTGCCTTACGACTTGA 1525
Query 73 CAGATGTGCCGCCCCAGCCAAACTCCCCACCTGA 106
||| ||| ||||||||||||||| ||||||||||
Sbjct 1524 CAGGTGTACCGCCCCAGCCAAACACCCCACCTGA 1491
>seq3579
Length=34062
Score = 77.0 bits (84), Expect = 1e-11
Identities = 76/97 (78%), Gaps = 1/97 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| ||||||| |||| || | || |||| |||| |||||||||| | | |
Sbjct 7092 CTTCTGCTCCACAGGAGGTTTCCGTGCCCC-TGAGCTTGCCTTGGGACACCTGCATCACG 7034
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACC 103
||| |||||||| ||||||||||||| | || ||||
Sbjct 7033 CTTTGACAGATGTACCGCCCCAGCCAAGCCCCTCACC 6997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634181973536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |