Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020 14-06-25] 62,257 sequences; 1,065,782,791 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq42637 309 1e-81 seq28277 107 6e-21 seq28268 107 6e-21 seq26880 98.7 3e-18 seq19617 98.7 3e-18 seq45531 95.1 4e-17 seq43752 91.5 5e-16 seq36101 89.7 2e-15 seq42248 86.0 2e-14 seq10641 80.6 9e-13 seq3579 77.0 1e-11 >seq42637 Length=248 Score = 309 bits (342), Expect = 1e-81 Identities = 177/181 (98%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 281 CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTG 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTG 122 Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400 |||||||||||||| || ||||| |||||||||||||||||||||| ||||||||||||| Sbjct 121 GCTGTGGTTTCGCTGGACAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCG 62 Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 2 Query 461 G 461 | Sbjct 1 G 1 >seq28277 Length=14843 Score = 107 bits (118), Expect = 6e-21 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| |||| || |||| |||| | ||||||||||||||||||| | Sbjct 8187 CTTCTGCTCCACGGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 8246 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| ||||||||| ||||||||||||||| | |||| Sbjct 8247 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCGCTGTC 8293 Score = 102 bits (112), Expect = 3e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| |||| || |||| |||| | ||||||||||||||||||| | Sbjct 7868 CTTCTGCTCCATGGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 7927 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 ||| |||| ||| ||||||||| ||||||||||||||| Sbjct 7928 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTG 7966 >seq28268 Length=7351 Score = 107 bits (118), Expect = 6e-21 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| ||||||| |||| || |||| |||| | ||||||||||||||||||| | Sbjct 902 CTTCTGCTCCACAGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 961 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| ||| ||||| ||||||||||||||| | |||| Sbjct 962 CTTTGACAGGTGTACCGGCCCAGTCAAACTCCCCACCTGCCGCTGTC 1008 >seq26880 Length=136732 Score = 98.7 bits (108), Expect = 3e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| |||| | |||| |||| | ||||||||||||||||||| | Sbjct 96043 CTTCTGCTCCACGGGAGGTTTCCATCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 96102 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 ||| |||| ||| | ||||||| ||||||||||||||| Sbjct 96103 CTTTGACAGGTGTACGGCCCCAGTCAAACTCCCCACCTG 96141 >seq19617 Length=1999 Score = 98.7 bits (108), Expect = 3e-18 Identities = 62/67 (93%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 381 CTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 440 || ||| |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct 1406 CTTGTTCATCCATTCATGCACGTCACTAATTAGATGACGAGGTATTTGGCTGCCTTAAGA 1347 Query 441 GAGTCAT 447 ||||||| Sbjct 1346 GAGTCAT 1340 >seq45531 Length=225038 Score = 95.1 bits (104), Expect = 4e-17 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| ||||||| |||| || |||| |||| | ||||||||||||||||||| | Sbjct 97576 CTTCTGCTCCACAGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 97517 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACT 96 ||| |||| ||| ||||||||| |||||| Sbjct 97516 CTTTGACAGGTGTACCGCCCCAGTCAAACT 97487 >seq43752 Length=13041 Score = 91.5 bits (100), Expect = 5e-16 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| |||| | |||| |||| | ||||||||||||||||||| | Sbjct 7437 CTTCTGCTCCATGGGAGGTTTCCATCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTAGG 7496 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCA 114 ||| |||| || ||||||| | ||||||||||||||| | ||||| Sbjct 7497 CTTTGACAGGTGCACCGCCCCTGTCAAACTCCCCACCTGCCGCTGTCA 7544 >seq36101 Length=26490 Score = 89.7 bits (98), Expect = 2e-15 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| ||||||| |||| || |||| |||| | ||||||||||||||||||| | Sbjct 7744 CTTCTGCTCCACAGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 7685 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAA 93 ||| |||| ||| ||||||||| ||| Sbjct 7684 CTTTGACAGGTGTACCGCCCCAGTCAA 7658 >seq42248 Length=41348 Score = 86.0 bits (94), Expect = 2e-14 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| |||| | |||| |||| | ||||||||||||||||||| | Sbjct 8492 CTTCTGCTCCACGGGAGGTTTCCATCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 8433 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACT 96 ||| |||| ||| ||||||||| |||||| Sbjct 8432 CTTTGACAGGTGTACCGCCCCAGTCAAACT 8403 >seq10641 Length=99604 Score = 80.6 bits (88), Expect = 9e-13 Identities = 75/94 (80%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 13 CTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAA 72 ||| ||||||| || || | |||| |||| | |||||||| | |||| ||| | || | Sbjct 1583 CTCCACAGGAGGTT-CTATCCTCCCTGAGCTCACCTTAGGAGATCTGCCTTACGACTTGA 1525 Query 73 CAGATGTGCCGCCCCAGCCAAACTCCCCACCTGA 106 ||| ||| ||||||||||||||| |||||||||| Sbjct 1524 CAGGTGTACCGCCCCAGCCAAACACCCCACCTGA 1491 >seq3579 Length=34062 Score = 77.0 bits (84), Expect = 1e-11 Identities = 76/97 (78%), Gaps = 1/97 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| ||||||| |||| || | || |||| |||| |||||||||| | | | Sbjct 7092 CTTCTGCTCCACAGGAGGTTTCCGTGCCCC-TGAGCTTGCCTTGGGACACCTGCATCACG 7034 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACC 103 ||| |||||||| ||||||||||||| | || |||| Sbjct 7033 CTTTGACAGATGTACCGCCCCAGCCAAGCCCCTCACC 6997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634181973536