Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calidris_20pugnax_20[refseq_20GCF_5F001431845.1_202015-11-04] 3,753 sequences; 1,229,094,286 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1702 95.1 1e-17 >seq1702 Length=36364 Score = 95.1 bits (104), Expect = 1e-17 Identities = 143/193 (74%), Gaps = 8/193 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||| ||| |||| | |||| Sbjct 12655 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCAGTATGCCGGCG 12597 Query 70 TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCACA 127 | |||||||||||||||||||||||||||| ||||| | | | || || | | ||| Sbjct 12596 GCCGGCCTGCTTTGAACACTCTAATTTTCTCAAAGTAAACGCTTCGGGCCCCGCGGGACA 12537 Query 128 C-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTCGC 182 | || ||| |||| ||| | || ||||| | |||||||| | || || ||||| Sbjct 12536 CTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTCGC 12477 Query 183 CGTGAGGCGGACC 195 | | |||||||| Sbjct 12476 CTCGCGGCGGACC 12464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595178360202