Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callipepla_20squamata_20[genbank_20GCA_5F002218305.1_202017-07-13] 34,302 sequences; 1,045,281,893 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value SEQ25496 291 2e-76 >SEQ25496 Length=1249 Score = 291 bits (322), Expect = 2e-76 Identities = 240/290 (83%), Gaps = 2/290 (1%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||| || | | | ||||||| |||||||| | || ||||||| || ||||| Sbjct 902 GCATCTTTACTCGTAATGCAATTTCGCCGAGTCTGTGGTCGAGACAGCAGAGAAGTCGTT 961 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 962 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 1021 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG-ATTGC-TCTAACAGAT 184 ||||||| ||||||||||||||||||||| ||| | |||||| |||| ||||| | | Sbjct 1022 TAGTTACCACCGCCGTTTACTGGGGCTTAAATTCTCAGCTTCGCCTTGCGGCTAACCGGT 1081 Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGC 244 || |||||||||||||||||||||||||||||| | ||||||||| ||| || ||| || Sbjct 1082 CCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACGTCTTCGC 1141 Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC 294 | |||||||||||| |||||||||||||| || |||||||| || Sbjct 1142 ACGGACCTGTGTTTTTAGTAAACAGTCGCTTCTCTCTGGTCTCTGCGACC 1191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062035575552