Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callipepla_20squamata_20[genbank_20GCA_5F002218305.1_202017-07-13] 34,302 sequences; 1,045,281,893 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq59 352 5e-95 seq2445 343 3e-92 seq4964 340 3e-91 seq2635 340 3e-91 seq119 340 3e-91 SEQ19929 302 8e-80 seq313 260 2e-67 seq75 260 2e-67 seq556 217 3e-54 seq487 212 1e-52 seq2333 187 4e-45 seq566 179 6e-43 seq15 172 9e-41 seq387 168 1e-39 seq193 143 5e-32 seq244 132 8e-29 seq406 113 8e-23 seq92 111 3e-22 seq1020 105 1e-20 seq174 104 4e-20 seq944 93.3 7e-17 SEQ25496 78.8 2e-12 seq171 77.0 6e-12 seq1209 75.2 2e-11 >seq59 Length=2375546 Score = 352 bits (390), Expect = 5e-95 Identities = 236/263 (90%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 823943 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 823884 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 823883 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 823824 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||| Sbjct 823823 CATCGAAGGATCAAAAAGCGACATCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 823764 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| || ||||| ||| | | |||||||| ||| Sbjct 823763 CTGTGGTAACTTTTCTGACACCTCCTGCTTCAAACCCCGAAAGTCAGAAGGATCGTGAGG 823704 Query 271 CCACACTTTCATGGTTTGTATTC 293 || | |||||||||| ||||||| Sbjct 823703 CCCCGCTTTCATGGTCTGTATTC 823681 >seq2445 Length=11563 Score = 343 bits (380), Expect = 3e-92 Identities = 234/263 (89%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 5867 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 5808 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 5807 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 5748 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 5747 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 5688 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 |||||| || ||||||| |||||| || ||||| ||| | | |||||||| ||| Sbjct 5687 CTGTGGGAAATTTTCTGACACCTCCTGCTTCAAACCCCGAAAGTCAGAAGGATCGTGAGG 5628 Query 271 CCACACTTTCATGGTTTGTATTC 293 || | |||||| ||| ||||||| Sbjct 5627 CCCCGCTTTCACGGTCTGTATTC 5605 >seq4964 Length=6702 Score = 340 bits (376), Expect = 3e-91 Identities = 233/263 (89%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 6661 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 6602 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 6601 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 6542 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 6541 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 6482 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 |||||| || |||||| |||||| || ||||| ||| | | |||||||| ||| Sbjct 6481 CTGTGGGAAAATTTCTGACACCTCCTGCTTCAAACCCCGAAAGTCAGAAGGATCGTGAGG 6422 Query 271 CCACACTTTCATGGTTTGTATTC 293 || | |||||| ||| ||||||| Sbjct 6421 CCCCGCTTTCACGGTCTGTATTC 6399 >seq2635 Length=10915 Score = 340 bits (376), Expect = 3e-91 Identities = 233/263 (89%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 4205 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 4146 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||| Sbjct 4145 TTAGTGGGTGAACAATCCATCGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 4086 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 4085 CATCGAAGGATCAAAAAGTGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 4026 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| || ||||| ||| | | |||||| | ||| Sbjct 4025 CTGTGGTAACTTTTCTGACACCTCCTGCTTCAAACCCCGAAAGTCAGAAGGATTGTGAGG 3966 Query 271 CCACACTTTCATGGTTTGTATTC 293 || | |||||| ||| ||||||| Sbjct 3965 CCCCGCTTTCACGGTCTGTATTC 3943 >seq119 Length=1774174 Score = 340 bits (376), Expect = 3e-91 Identities = 234/263 (89%), Gaps = 1/263 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1068704 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 1068763 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 1068764 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 1068823 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||||||| Sbjct 1068824 CATCGGAGGATCAAAAAGCGACGTTGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 1068883 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| || || || ||| | | |||||||| ||| Sbjct 1068884 CTGTGGTAACTTTTCTGACACCTCCTGCTTC-AACCCCGAAAGTCAGAAGGATCGTGAGG 1068942 Query 271 CCACACTTTCATGGTTTGTATTC 293 || | |||||||||| ||||||| Sbjct 1068943 CCCCGCTTTCATGGTCTGTATTC 1068965 >SEQ19929 Length=1491 Score = 302 bits (334), Expect = 8e-80 Identities = 190/205 (93%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 737 TCATCAGTAGGGTAAAACTAACCTGTCTTGCGACGGTCTAATCCCAGCTCACGTTCCCTA 678 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||| |||||| |||| Sbjct 677 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATGGGAAGATCCGA 618 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 617 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 558 Query 211 CTGTGGTAACTTTTCTGGCACCTCT 235 ||||||||||||||||| ||||||| Sbjct 557 CTGTGGTAACTTTTCTGACACCTCT 533 >seq313 Length=974481 Score = 260 bits (288), Expect = 2e-67 Identities = 186/214 (87%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||| ||||| | |||| || |||| |||| |||||||||||||||| Sbjct 911835 TCATCAGTAGGGTAAAAATAACCCGACTCACGATGGTCCAAACTCAGCTCACGTTCCCTA 911894 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||| || |||||||| |||||| ||||| ||||||||||||||| Sbjct 911895 TTAGTGGGTGAACCATTCAACGCTTGGTGAATTCAGCTTCACAATGATAGGAAGAGCCAG 911954 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||| ||||| | ||| |||| ||||||||||||||||||||| ||||||||||||| Sbjct 911955 CATCGAAAGATCAGACAGCGACGTTGCTATGAACGCTTGGCTGCCAGAAGCCAGTTATCC 912014 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 ||||||||||||||||| |||||| || ||||| Sbjct 912015 CTGTGGTAACTTTTCTGACACCTCCTGCTTCAAA 912048 >seq75 Length=2181261 Score = 260 bits (288), Expect = 2e-67 Identities = 177/198 (89%), Gaps = 3/198 (2%) Strand=Plus/Plus Query 37 GTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96 ||||||||||||||||||||||| ||| |||||||| ||||||||||||| ||| | ||| Sbjct 1779915 GTAGGGTAAAACTAACCTGTCTCGTGATGGTCTAAATCCAGCTCACGTTCTCTACTGGTG 1779974 Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156 ||||||||||||||||||| |||||||||||| ||||||| |||| |||||||| Sbjct 1779975 GGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAG---GAGCTGACATCGA 1780031 Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 ||||||||||||||||||||| | ||| ||||||| |||||||||||||||||||||||| Sbjct 1780032 AGGATCAAAAAGCAACGTCGCCACGAATGCTTGGCCGCCACAAGCCAGTTATCCCTGTGG 1780091 Query 217 TAACTTTTCTGGCACCTC 234 ||||||||||| |||||| Sbjct 1780092 TAACTTTTCTGACACCTC 1780109 >seq556 Length=586098 Score = 217 bits (240), Expect = 3e-54 Identities = 170/203 (84%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||| |||||||||| |||| ||||||||||| |||||| ||||||||| ||||||||| Sbjct 478202 CATCAATAGGGTAAAAGTAACGTGTCTCATGACAGTCTAATCCCAGCTCAAGTTCCCTAT 478261 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||| | |||||||||||| ||| ||||||||| || Sbjct 478262 TAGTGGGTGAACAATCCAACTCCAGGTGAATTCTGCTTCACAGTGACAGGAAGAGCTGAA 478321 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||| |||||||||||||| | ||||||| ||| ||||| | |||||| ||||||| ||| Sbjct 478322 ATCAAAGGATCAAAAAGCGATGTCGCTAGGAAGGCTTGTCCGCCACAGGCCAGTTTTCCA 478381 Query 212 TGTGGTAACTTTTCTGGCACCTC 234 | |||||||| |||| |||||| Sbjct 478382 TATGGTAACTCCTCTGACACCTC 478404 >seq487 Length=680480 Score = 212 bits (234), Expect = 1e-52 Identities = 129/137 (94%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 588034 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 588093 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| Sbjct 588094 TTAGTGGGTGAACAATCCAACGCTTGGTGAACTCTGCTTCACAATGATAGGAAGAGCCGA 588153 Query 151 CATCGAAGGATCAAAAA 167 ||||||||||||||||| Sbjct 588154 CATCGAAGGATCAAAAA 588170 >seq2333 Length=12123 Score = 187 bits (206), Expect = 4e-45 Identities = 136/158 (86%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 136 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCC 195 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 10919 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCC 10978 Query 196 ACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGAC 255 ||||||||||||||||||||| || ||||||| |||||| || ||||| ||| | | Sbjct 10979 ACAAGCCAGTTATCCCTGTGGGAAATTTTCTGACACCTCCTGCTTCAAACCCCGAAAGTC 11038 Query 256 TAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||||| ||||| | |||||| ||| ||||||| Sbjct 11039 AGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 11076 >seq566 Length=577805 Score = 179 bits (198), Expect = 6e-43 Identities = 110/117 (94%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 416962 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 416903 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147 ||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct 416902 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGC 416846 >seq15 Length=3506296 Score = 172 bits (190), Expect = 9e-41 Identities = 160/203 (79%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||| ||| || |||||| |||||||| | | ||| | ||| || |||| || ||||||| Sbjct 1967178 TCAACAGAAGAGTAAAATTAACCTGTTTTAAGACATTTTAATCCTAGCTTACATTCCCTA 1967237 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 | ||||| ||||||| ||| |||| ||| | | |||| ||||||| |||||| || Sbjct 1967238 TAAGTGGACGAACAATACAATGCTTGGTGAACTTTACTTCACAATGATAGAAAGAGCTGA 1967297 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||| ||||||||||||| || || || ||| | ||| | ||| ||||| ||||||||| Sbjct 1967298 CATCAAAGGATCAAAAAGTGACATCACTGTGAGCACTTTGTTGCAACAAGACAGTTATCC 1967357 Query 211 CTGTGGTAACTTTTCTGGCACCT 233 ||||||||||||||||| ||||| Sbjct 1967358 CTGTGGTAACTTTTCTGACACCT 1967380 >seq387 Length=843526 Score = 168 bits (186), Expect = 1e-39 Identities = 149/185 (81%), Gaps = 1/185 (1%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||| || ||| |||| | | |||| | |||||||||| Sbjct 222006 CATCAGTAGGGTAAAACTAACCTGTATCGTGATGGTCCAGTCGCAGCCCTCGTTCCCTAT 221947 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||| ||||| |||||||| ||| ||||||| |||| |||||||||| || || Sbjct 221946 TTGTGTGTGAATAATCCAACTCTTGGTGAATTCTTCTTCACGGTGATAGGAAGGGCTGAT 221887 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || |||||||| ||| || || ||||| | ||||||||||||||| |||||| | | || Sbjct 221886 ATTGAAGGATCCAAATGCGACATCGCTCTTAACGCTTGGCTGCCATCAGCCAG-TGTTCC 221828 Query 212 TGTGG 216 ||||| Sbjct 221827 TGTGG 221823 >seq193 Length=1395309 Score = 143 bits (158), Expect = 5e-32 Identities = 99/112 (88%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||| ||||| |||||||||| || ||||||| ||||| |||||||||||| Sbjct 1233495 TCATCAGTAGGGTGAAACTGACCTGTCTCACGATGGTCTAATCCCAGTTCACGTTCCCTA 1233436 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGA 142 ||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct 1233435 TTAGTGGGTGAACAATCCAACGCTTTGTGGCTTCTGCTTCGTAATGATAGGA 1233384 >seq244 Length=1141075 Score = 132 bits (146), Expect = 8e-29 Identities = 188/262 (72%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||| ||||| | | |||| || |||||| || ||||| Sbjct 243770 CATCAGTAGGGTAAAACTAACTCATCTCACAAGAGCCTAATCCTAGCTCATTTTTCCTAT 243711 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 ||||| | ||| ||| | | |||| ||||||| | ||||| | | ||| ||| Sbjct 243710 TAGTGAACAGAAAATGAAACACCTGGTGAATCCTGCTTCACTGTGATACGGAAAGCTGAC 243651 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | |||| ||||||||||||| || |||| | |||||||| | | |||||||||| || Sbjct 243650 ACAGAAGAATCAAAAAGCAACATCATTATGGATGCTTGGCTTCAATAAGCCAGTTACCCT 243591 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG-GGACTAAAGGATCGATAGG 270 || ||||||| | | | || || || ||| ||| || | | || | | | ||| Sbjct 243590 TGATGTAACTTATACGAC-CCCATATACTTAAAATTCAAGAAGTCAGAAAGGTTGTGAGG 243532 Query 271 CCACACTTTCATGGTTTGTATT 292 || |||||||| | |||||||| Sbjct 243531 CCTCACTTTCAGGATTTGTATT 243510 >seq406 Length=810124 Score = 113 bits (124), Expect = 8e-23 Identities = 64/65 (98%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 84099 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 84040 Query 91 TTAGT 95 ||||| Sbjct 84039 TTAGT 84035 >seq92 Length=2013017 Score = 111 bits (122), Expect = 3e-22 Identities = 70/75 (93%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 16708 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAATCCCAGCTCACACTCCCTA 16649 Query 91 TTAGTGGGTGAACAA 105 ||||||| |||||| Sbjct 16648 TTAGTGG--GAACAA 16636 >seq1020 Length=180560 Score = 105 bits (116), Expect = 1e-20 Identities = 63/66 (95%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 |||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||| Sbjct 3917 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAATCCCAGCTCATGCTCCCTAT 3976 Query 92 TAGTGG 97 |||||| Sbjct 3977 TAGTGG 3982 >seq174 Length=1474877 Score = 104 bits (114), Expect = 4e-20 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 724089 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 724148 >seq944 Length=231102 Score = 93.3 bits (102), Expect = 7e-17 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||| |||||||| |||||||||||||||| ||| || ||| |||||||||| |||| Sbjct 183056 TCATGAGTAGGGTGAAACTAACCTGTCTCAGGACAGTTTAACTACAGCTCACGTCCCCTG 182997 Query 91 TTAGTGGGTGAACAATCCAACGCTTA 116 |||||||| ||||| |||| ||||| Sbjct 182996 TTAGTGGGCAAACAACCCAATGCTTA 182971 >SEQ25496 Length=1249 Score = 78.8 bits (86), Expect = 2e-12 Identities = 123/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| |||||||||||||| ||| || ||| |||| ||||| ||||| Sbjct 336 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTGCCGCTTTAATGGGCGAACAGCCCAACC 395 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| | | | || | | ||| || ||||||||||||| | |||| Sbjct 396 CTTGGGACCTACTCCAGCCCC---AGGATGCGACGAGCCGACATCGAGGTGCCAAACCAT 452 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| |||| || ||||| | |||| |||||||| | |||| ||||| Sbjct 453 CCCGTCGATATGGACTCTTGGGGAAGATCAGCCTGTTATCCCCGGGGTACCTTTT 507 >seq171 Length=1476434 Score = 77.0 bits (84), Expect = 6e-12 Identities = 45/47 (96%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAG 77 |||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct 657096 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGATCTAAACCCAG 657142 >seq1209 Length=88555 Score = 75.2 bits (82), Expect = 2e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||| |||||||||| ||||||||||| ||||||||| ||||| | ||||||| Sbjct 27150 TCATCAGTAAGGTAAAACTAGCCTGTCTCATGCTGGTCTAAACATAGCTCTCATTCCCTA 27209 Query 91 TTAGTG 96 || || Sbjct 27210 CTACTG 27215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854106923712