Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callipepla_20squamata_20[genbank_20GCA_5F002218305.1_202017-07-13] 34,302 sequences; 1,045,281,893 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value SEQ23930 232 1e-58 >SEQ23930 Length=1308 Score = 232 bits (256), Expect = 1e-58 Identities = 168/193 (87%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||| Sbjct 1050 GGCGTCGCTGCATCAGGCTTTCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 1109 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||| | Sbjct 1110 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGATCACCCTCTCAGGCCGGCTACCCGT 1169 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||| ||| |||| | ||||||| | || || ||||||| || |||| | || Sbjct 1170 CGTCGCCTTGGTAGGCCATTACCCCACCAACAAGCTGATAGGCCGCGGGCTCATCCTGCA 1229 Query 181 GCGATAAATCTTT 193 ||| ||| |||| Sbjct 1230 CCGA-AAAACTTT 1241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998057528832