Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callipepla_20squamata_20[genbank_20GCA_5F002218305.1_202017-07-13] 34,302 sequences; 1,045,281,893 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value SEQ23930 140 3e-31 >SEQ23930 Length=1308 Score = 140 bits (154), Expect = 3e-31 Identities = 122/152 (80%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||||| ||||||| ||| || |||| |||||| ||||| |||| || Sbjct 147 TCGAGTTGCAGACCCCAATCCGAACTGAGACCAGCTTTAAGGGATTCGCTCCACCTCACG 206 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || |||||||||| |||||||| | ||||||||||||| |||||||| || Sbjct 207 GTATCGCAGCCCTCTGTACTAGCCATTGTAGCATGTGTGAAGCCCTAGACATAAGGGGCA 266 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 ||| || ||||||||||||||||||||||||| Sbjct 267 TGATGATTTGACGTCATCCCCACCTTCCTCCG 298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415861762940