Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq21888 89.7 8e-16 >seq21888 Length=44598 Score = 89.7 bits (98), Expect = 8e-16 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 |||| ||| |||||| || ||||| ||| || ||||| | | |||||| |||||| || Sbjct 15748 TACAGGGGGAAGGGACTTAATCAACATGAGTTT-ATGACCCACACTTACTGGGAATT-CC 15805 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATT-A 120 | ||| | || |||||||| ||||||| || || ||||| | || | Sbjct 15806 TTGTTCACAGTGAAGAATTGCAACCCCTAATCCCCACCATGAATGGGGTTCAACGGTTTA 15865 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||| ||| ||| ||| | || ||| | ||| ||||||||||||| | Sbjct 15866 CCCGTGACTGCCGGTGGAGGGTAGGCACAAACTGAGT----CAGAGTAGCGCGCGTGCAG 15921 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||| | |||||||||||||||||||| ||||||||| ||||| || ||||| Sbjct 15922 CCCCGGACATCTAAGGGCATCACAGATCTGTTATTG-CTCAATCTCGGGTGGC 15973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751610441910