Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq28219 114 2e-23 seq13708 87.8 3e-15 seq9572 75.2 2e-11 >seq28219 Length=8720 Score = 114 bits (126), Expect = 2e-23 Identities = 198/280 (71%), Gaps = 12/280 (4%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| || || ||| | | | |||||||||| |||||||| ||| Sbjct 3174 ATGCTCTTAGCTGAGTGTCCCACGGGGCCTGAAGCATTTACTTTGAGAAAATTAG--TGT 3117 Query 98 TCAAAGCAGGCCTTTG-CTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 |||||||||| | | || | |||| ||| |||||||| |||||||| | | ||| Sbjct 3116 TCAAAGCAGGTCAGTCACTGGCATACTGCAGCTAGGAATAATGAAATAGGAC-TCCAGTT 3058 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216 ||||||| ||||||| | | || | |||||||| |||||| | | ||| | || Sbjct 3057 CTATTTTATTGGTTTTCGGAAACGGAATCATGATTAAGAGGGATGGCCAGGGATACTCGT 2998 Query 217 ATTCAATTGTCA---GAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC 273 ||| || || || | | |||||||||| || ||| ||| || ||||| Sbjct 2997 ATTG---TGCCACTAGAAGCGGAATTCTTGGACCGGCACAAAACTGCCTAGAGCAAAAGC 2941 Query 274 GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 || ||||| |||||||||||||||| |||| |||||| Sbjct 2940 ATTTGCCAAGAATGTTTTCATTAATCA-AGAACAAAAGTT 2902 >seq13708 Length=94412 Score = 87.8 bits (96), Expect = 3e-15 Identities = 130/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 137 ATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAG 196 || ||||||||| | |||||||||||||||||||| | | || | ||||||| || Sbjct 94132 ATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTTTCGGAAACGGGGCCGTGATTAAGAG 94190 Query 197 GGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGA 256 ||| | || | | ||||| | |||||||||||||||||| |||| Sbjct 94191 GGACGGCTGGAAGCATTTGTATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGA 94250 Query 257 CTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316 | ||| |||||||| || | ||| |||||||||||||||| |||||||||| || Sbjct 94251 CAGCCTAGAGCGAAAGCATTTGCTAAGAATGTTTTCATTAATCA-AGAACGAAAGTCAGA 94309 Query 317 GG 318 || Sbjct 94310 GG 94311 >seq9572 Length=53871 Score = 75.2 bits (82), Expect = 2e-11 Identities = 128/182 (70%), Gaps = 19/182 (10%) Strand=Plus/Minus Query 140 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG---CCGTAATGATTAATAG 196 |||||||| | | |||||||||||||||||| || | || |||| |||||| || Sbjct 15283 GAATAGGAACTTCAGTTCTATTTTGTTGGTTTTCAGAAGCGGGTCCGT---GATTAAGAG 15227 Query 197 GGATAGTCGGGGGTGTCAGTATTCA-ATTGTC-----AGAGGTGAAATTCTTGGATTTAT 250 |||| | | ||| ||||| ||||| || ||||||||||||||||| Sbjct 15226 GGATGGCCAGGGAC------ATTCACATTGTGCAGCTAGGGGTGAAATTCTTGGATTAGC 15173 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| || ||||| || ||| || ||||||||||||| |||||||| Sbjct 15172 ACAAGACAGCCTAGAGCAAAAGCATTTGCCAGTAATTTTTTCATTAATCA-AGAACGAAA 15114 Query 311 GT 312 || Sbjct 15113 GT 15112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914710605952