Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq21888 89.7 8e-16 seq39913 78.8 1e-12 >seq21888 Length=44598 Score = 89.7 bits (98), Expect = 8e-16 Identities = 82/101 (81%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||| ||||||||||||| |||| | |||||||||||||||||||| ||||||||| || Sbjct 15901 GTCAGAGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGATCTGTTATTG-CT 15959 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||| | || |||||| | || | ||||||||| ||| Sbjct 15960 CAATC-TCGGGTGGCTGAACACCGCTTTTCCCTCTAACAAG 15999 >seq39913 Length=27755 Score = 78.8 bits (86), Expect = 1e-12 Identities = 49/53 (92%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||| ||||| | |||||||| |||||||||| Sbjct 25719 AGAACGGCCATGCACCACCACCCATGGAATCGACAAAGAGCTCTCAATCTGTC 25667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796387234194