Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq21888 104 4e-20 >seq21888 Length=44598 Score = 104 bits (114), Expect = 4e-20 Identities = 160/224 (71%), Gaps = 7/224 (3%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| ||||||||| |||||||||||||||||||| | |||| ||||||||||||| Sbjct 15965 AGATTGAG-CAATAACAGATCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC 15907 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 ||||| || || | | ||| |||| || |||||| | | || | Sbjct 15906 TCTGAC----TCAGTTTGTGCCTACCCTCCACCGGCAGTCACGGGTAAACCGTTGAACCC 15851 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCT-TCAACGAGGAATGCCTAGTAA 284 | || || ||||||| | |||||||| || | || | ||| |||||| || ||||| Sbjct 15850 CATTCATGGTGGGGATTAGGGGTTGCAATTCTT-CACTGTGAACAAGGAATTCCCAGTAA 15792 Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | | ||||| | | | |||||||| |||||| ||| |||| Sbjct 15791 GTGTGGGTCATAAACTCATGTTGATTAAGTCCCTTCCCCCTGTA 15748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946693494272