Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq49668 477 3e-132 seq4627 181 3e-43 seq8959 86.0 2e-14 seq5973 84.2 7e-14 >seq49668 Length=438 Score = 477 bits (528), Expect = 3e-132 Identities = 284/297 (96%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| |||||| | | |||||||||||||||||| Sbjct 20 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGCGCCAGACTAGAGTCAAGCTCAA 79 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 80 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 139 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 140 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 199 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 200 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 259 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 260 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 316 >seq4627 Length=27428 Score = 181 bits (200), Expect = 3e-43 Identities = 159/196 (81%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||| ||||||||||||||| | ||| |||||| | | |||||| ||||||||||| Sbjct 12943 TCCCATTTATTCTACACCTCTGATGTCTCTTCACAGCGCCAGACTAG--TCAAGCTCAAC 13000 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG- 356 ||||||||||||||| | |||| |||| || |||| |||||||||||||| ||| | Sbjct 13001 AGGGTCTTCTTTCCCTGGCAATTCTACCAAACCTGTTCTCTTGGCTGTGGTTTTGCTGGA 13060 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||| ||||||||||||||||||| || |||| ||||||| | ||||| | || Sbjct 13061 ATAGTAAGTAGGGACAGTGGGAATCTCATTCATCCGTTCATGCACATCACTGTGCATTTG 13120 Query 417 ACGAGGCATTTGGCTA 432 | |||||||||||||| Sbjct 13121 AGGAGGCATTTGGCTA 13136 >seq8959 Length=31214 Score = 86.0 bits (94), Expect = 2e-14 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| |||||| |||||| |||| || || | |||| | | ||||||||||||||||| Sbjct 31101 CTTCTGCTCTGCAGGAGGTTTCCGTCCTGCCTGAGCTCACTTTAGGACACCTGCGTTACA 31042 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| || |||||| ||||||||||| || | |||| Sbjct 31041 CTTTGACAGGTGTACCACCCCAGTTAAACTCCCCACTTGCCGCTGTC 30995 >seq5973 Length=101063 Score = 84.2 bits (92), Expect = 7e-14 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| |||||| |||| |||| || ||| |||| | ||||||||||||||| ||| | Sbjct 73568 CTTCTGCTCTGTGGGAGGTTTCCGTCCTCGCTGAGCTCGCCTTAGGACACCTGCATTACG 73627 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 ||| |||| | | ||||||||| |||||||| |||||| Sbjct 73628 CTTTGACAGGTTTACCGCCCCAGTCAAACTCCTCACCTG 73666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634325593152