Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cathartes_20aura_20[genbank_20GCA_5F000699945.1_202014-06-11] 104,141 sequences; 1,152,571,117 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq19097 122 2e-25 seq22300 93.3 8e-17 >seq19097 Length=2978 Score = 122 bits (134), Expect = 2e-25 Identities = 133/173 (77%), Gaps = 3/173 (2%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACT-TTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | | |||||||||| ||||||||||||| Sbjct 89 ATGCTCTTTGCTGAGTGTCCCGTGGGGCCCGAAGTGTTTACTTTGAGAAAATTAGAGTGT 148 Query 98 TCAAAGCAGGCC-TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 |||||||||||| ||| | |||| ||| |||||||| ||||||||| | |||| Sbjct 149 TCAAAGCAGGCCGGCCGCTGGCATACTGCAGCTAGGAATAATGGAATAGGAC-TCAGGTT 207 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGG 209 ||||||||||||||| | | | | | |||||||| ||||| || ||||| Sbjct 208 CTATTTTGTTGGTTTTTGGAAACAGGGCCATGATTAAGAGGGACAGCTGGGGG 260 >seq22300 Length=40658 Score = 93.3 bits (102), Expect = 8e-17 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC-TTTGCTCGAATACATTAGCATGG 132 |||||||||| ||||||||||||||||||||||||| || | |||| ||| || Sbjct 11456 TTTACTTTGACAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCAGCATACTGCAGCTAGG 11515 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 |||||| ||||||||| | | ||||||||||||||| || | | | | | ||||||| Sbjct 11516 AATAATGGAATAGGAC-TCCAGTTCTATTTTGTTGGGTTTTGGAAATGGGGCCATGATTA 11574 Query 193 ATAGG 197 | ||| Sbjct 11575 AGAGG 11579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914246901568