Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cathartes_20aura_20[genbank_20GCA_5F000699945.1_202014-06-11] 104,141 sequences; 1,152,571,117 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq49648 309 5e-82 seq44169 300 3e-79 seq66290 293 4e-77 seq36931 286 6e-75 seq65252 268 2e-69 seq59652 129 1e-27 seq68199 125 1e-26 seq60903 120 5e-25 seq20036 120 5e-25 seq70328 104 4e-20 seq9303 95.1 2e-17 seq62292 91.5 3e-16 seq24168 86.0 1e-14 seq17728 82.4 1e-13 >seq49648 Length=58383 Score = 309 bits (342), Expect = 5e-82 Identities = 191/204 (94%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 29020 TCATCAGTAGGGTAAAACTAACCTGTCTCACAACGGTCTAAACCCAGCTCACGTTCCCTA 29079 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 29080 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 29139 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || Sbjct 29140 CATCGAAGGATCAAAAAGCAACGTCTCTATGAACGCTTGGCCGCCACAAGCCAGTTAACC 29199 Query 211 CTGTGGTAACTTTTCTGGCACCTC 234 |||||||||||| |||| |||||| Sbjct 29200 CTGTGGTAACTTGTCTGACACCTC 29223 >seq44169 Length=25845 Score = 300 bits (332), Expect = 3e-79 Identities = 226/266 (85%), Gaps = 10/266 (4%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| |||| ||||| ||||||||| |||||||| Sbjct 17819 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGATCTAATCCCAGCTCATGTTCCCTA 17878 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||| || |||||||||||||||||| |||||||||||| ||||| ||||||||| | Sbjct 17879 TTAATGTGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATTGGAAGAGCCAA 17938 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 17939 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 17998 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGC----CTCAAATTTCGAGGGACTAAAGGATCGA 266 ||||||||||||||||| |||||| || | |||| | || ||||||| Sbjct 17999 CTGTGGTAACTTTTCTGACACCTCCTGCAATACCCAAAAAGCCAG------AAGGATCAC 18052 Query 267 TAGGCCACACTTTCATGGTTTGTATT 292 ||||| | |||||||||| || ||| Sbjct 18053 GAGGCCCCGCTTTCATGGTCTGCATT 18078 >seq66290 Length=87616 Score = 293 bits (324), Expect = 4e-77 Identities = 221/260 (85%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 34 TCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTA 93 ||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||| Sbjct 77131 TCAGTAGGGTAAAACTAACCTGTCTCACAACAGTCTAATCCCAGCTCACGTTCCCTATTA 77072 Query 94 GTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACAT 153 ||||||||||| |||||||||| ||||||||||||| ||||||||||||| ||| || Sbjct 77071 GTGGGTGAACAGTCCAACGCTTGGCGAATTCTGCTTCACAATGATAGGAAGAGTCGATAT 77012 Query 154 CGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTG 213 |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||| Sbjct 77011 CGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATACCTG 76952 Query 214 TGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCA 273 ||||| |||||||| |||||| || | ||| | | | ||| |||| ||||| Sbjct 76951 TGGTAGCTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGCCAGAAGAATCGTGAGGCCC 76892 Query 274 CACTTTCATGGTTTGTATTC 293 |||||| ||| ||||||| Sbjct 76891 TGCTTTCACGGTCTGTATTC 76872 >seq36931 Length=63773 Score = 286 bits (316), Expect = 6e-75 Identities = 221/263 (84%), Gaps = 5/263 (2%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 48420 TCATCAGTCGGGTAAAACTAACCTGTCTCATGATGGTCTAAACCCAGCTCACGTTCCCTA 48479 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||| ||||| ||||||||||| |||||||||||| ||||||||||||||| | Sbjct 48480 TTAGTGGATGAACTATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCTA 48539 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 48540 -----AAGGATCAAAAAGCGGCGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCG 48594 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| | | ||| | | | |||||||| ||| Sbjct 48595 CTGTGGTAACTTTTCTGACACCTCCTACTTAAAACCCAAAAAGCCAGAAGGATCGTGAGG 48654 Query 271 CCACACTTTCATGGTTTGTATTC 293 || |||||| ||| ||||||| Sbjct 48655 CCCTGCTTTCACGGTCTGTATTC 48677 >seq65252 Length=21045 Score = 268 bits (296), Expect = 2e-69 Identities = 178/198 (90%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 20722 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAATCCCAGCTCACGTTCCCT 20663 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 |||||||||||||||||||| |||| |||||||||||| ||| |||||||| || Sbjct 20662 GTTAGTGGGTGAACAATCCAATGCTTGGTGAATTCTGCTTCACAGTGACAGGAAGAGTCG 20603 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 | || ||| |||||||||| ||||||||||||| ||||||| |||||||||||||||| Sbjct 20602 ATATTGAATGATCAAAAAGTGACGTCGCTATGAATGCTTGGCCTCCACAAGCCAGTTATC 20543 Query 210 CCTGTGGTAACTTTTCTG 227 |||||||||||||||||| Sbjct 20542 CCTGTGGTAACTTTTCTG 20525 >seq59652 Length=6169 Score = 129 bits (142), Expect = 1e-27 Identities = 77/81 (95%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct 1166 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAGCCCAGCTCACGTTCCCTG 1107 Query 91 TTAGTGGGTGAACAATCCAAC 111 |||||||||||||||||||| Sbjct 1106 CTAGTGGGTGAACAATCCAAC 1086 >seq68199 Length=29811 Score = 125 bits (138), Expect = 1e-26 Identities = 69/69 (100%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5428 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 5369 Query 90 ATTAGTGGG 98 ||||||||| Sbjct 5368 ATTAGTGGG 5360 >seq60903 Length=51443 Score = 120 bits (132), Expect = 5e-25 Identities = 83/93 (89%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||| ||||||||||| ||||| |||||| ||||| ||||||| Sbjct 40959 TCATCAGTAGGGTAAAACTAATCTGTCTCATGATGGTCT-AACCCAACTCACATTCCCTA 40901 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATT 123 ||||||||||||| ||||| ||||| ||||| Sbjct 40900 TTAGTGGGTGAACCATCCAGCGCTTGATGAATT 40868 >seq20036 Length=53991 Score = 120 bits (132), Expect = 5e-25 Identities = 186/263 (71%), Gaps = 6/263 (2%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||| | | |||||||||| ||||||||| | ||||||||||||||| |||| | Sbjct 44199 TCATCAGGAAGATAAAACTAACTTGTCTCATGGCAGTCTAAACCCAGCTCGTGTTCATTG 44140 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||| ||||| ||| ||||| ||| |||||||| || | | | ||||| |||||| Sbjct 44139 TTAATGGGTAAACCGACCAACACTTGATGAATTCTGTTTTGTGGTAACAGGAAAAGCCGA 44080 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 | || |||| | ||| | | ||| || ||| ||||| || | ||| || Sbjct 44079 CTTCAAAGGGT--TGAAGTACATTTGCT---AATAGTTGACTGCCGCAGGGTGGTTTTCT 44025 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| || |||| || | ||| | || | | | | ||| ||| Sbjct 44024 CTGTGGTAACTTTTCTGACATCTCTTGCTTAAAACCTAGAAAGTC-AGAAAATCCTGAGG 43966 Query 271 CCACACTTTCATGGTTTGTATTC 293 ||||||| |||| ||||||| Sbjct 43965 CCACACTAGAATGGCCTGTATTC 43943 >seq70328 Length=30283 Score = 104 bits (114), Expect = 4e-20 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||| ||||| || |||||||||||||||| |||||||| Sbjct 16985 TCATCAGTAGGGTAAAACTAACCTATCTCACAACAGTCTAAACCCAGCTCATGTTCCCTA 17044 Query 91 TTAGTGGGTGAA 102 |||||||| ||| Sbjct 17045 TTAGTGGGAGAA 17056 >seq9303 Length=193910 Score = 95.1 bits (104), Expect = 2e-17 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||| Sbjct 35903 TCATCAGTAGGGTAAAACTAACCTGTCTCACAATGGTCTAAACCCAGCTCATGTTCCCTA 35962 Query 91 TT 92 || Sbjct 35963 TT 35964 >seq62292 Length=51057 Score = 91.5 bits (100), Expect = 3e-16 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||| |||||||||||||||||| |||||||||| ||||||||| |||||||| Sbjct 11917 TCATCAGTAGGATAAAACTAACCTGTCTCACGACGGTCTAATCCCAGCTCATGTTCCCTA 11976 >seq24168 Length=96016 Score = 86.0 bits (94), Expect = 1e-14 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCAC 82 |||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct 38002 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAATCCCAGCTCAC 37951 >seq17728 Length=72312 Score = 82.4 bits (90), Expect = 1e-13 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||| |||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 12489 TCATCAGTAAGGTAAAACTAACCTGTCTCACAATGGTCT-AACCCAGCTCACGTTCCCTC 12547 Query 91 TT 92 || Sbjct 12548 TT 12549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853510219296