Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cathartes_20aura_20[genbank_20GCA_5F000699945.1_202014-06-11] 104,141 sequences; 1,152,571,117 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq19097 86.0 6e-15 seq22300 77.0 3e-12 >seq19097 Length=2978 Score = 86.0 bits (94), Expect = 6e-15 Identities = 80/99 (81%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| ||| | |||| | | || Sbjct 125 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCTGGCATACTGCAGCTAGG 184 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||| ||||||||| | ||||||||||||| ||||| Sbjct 185 AATAATGGAATAGGAC-TCAGGTTCTATTTTGTTGGTTT 222 >seq22300 Length=40658 Score = 77.0 bits (84), Expect = 3e-12 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| || | |||| | | || Sbjct 11456 TTTACTTTGACAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCAGCATACTGCAGCTAGG 11515 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||| ||||||||| | | |||||||||||| || || Sbjct 11516 AATAATGGAATAGGAC-TCCAGTTCTATTTTGTTGGGTT 11553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511483460640