Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cathartes_20aura_20[genbank_20GCA_5F000699945.1_202014-06-11] 104,141 sequences; 1,152,571,117 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq50240 176 1e-41 >seq50240 Length=17536 Score = 176 bits (194), Expect = 1e-41 Identities = 178/231 (77%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 24 CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATT 83 |||||||| ||||||| ||||| | ||||||||||||||| ||||||| || || || Sbjct 7457 CAAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGCGTCATC 7516 Query 84 TGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATC 143 |||||||||| || |||||| || | |||||||||||||||||||||| | |||| Sbjct 7517 GGCGCGCCTGCATCCCTCCTTGCATTT---AGCCGTTTCTCAGGCTCCCTCTTCAGAATT 7573 Query 144 GAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAG 203 ||||||| ||||||| | ||| || | |||| ||||||| | |||||||| ||| Sbjct 7574 GAACCCTGATTCCCCATCACCTGTGGTCACCACGGTAGGCACAGACAGTACCATCGGAAG 7633 Query 204 TTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGAT 254 |||| ||||||| ||||||| | ||||||| | | || | |||||| Sbjct 7634 CTGATGGGGCAGACATTTGAAGGGGTCATCGCCACCGCGGGGTCGTGCGAT 7684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1508827054336