Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetura_20pelagica_20[refseq_20GCF_5F000747805.1_202014-09-04] 19,072 sequences; 1,119,188,094 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2130 82.4 1e-13 >seq2130 Length=11326115 Score = 82.4 bits (90), Expect = 1e-13 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 161 GCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTT 220 ||||||||||| | || | || | ||| ||||| ||| ||||||| | | Sbjct 1906071 GCTACACTGACTGGCTCAGCTTGTGTCTGCCCTCTGCCGGCAGGCATGGGTAACCCATTG 1906130 Query 221 AAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTA 280 || | | | ||| ||||||| | ||||||||| || | ||| ||| |||||| || | Sbjct 1906131 AACCCCATTTGTGATGGGGATTAGGGATTGCAATTCTTCCCCTTGAACAAGGAATTCCCA 1906190 Query 281 GTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| ||| ||||| ||| ||| ||||||| || ||| || |||||| Sbjct 1906191 GTAAATGCGGGTCATAAGCTCGCATTGATTAAGTACCTACCATTTGTA 1906238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947019350016