Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Charadrius_20vociferus_20[refseq_20GCF_5F000708025.1_202014-08-05] 15,167 sequences; 1,219,859,583 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq291 80.6 1e-12 >seq291 Length=3554918 Score = 80.6 bits (88), Expect = 1e-12 Identities = 70/87 (80%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||| ||||||||||| | ||||||| ||| |||||||||||||||||||||||| Sbjct 560701 GGACCCAAAAGATGGTGACCCATGCCTGGGCAGGACGAAGCCAGAGGAAACTCTGGTGGA 560642 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAAT 655 || | ||| || ||| | || |||| Sbjct 560641 GGTCCATAGCAGTCCTGACATGAAAAT 560615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079674667850