Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydotis_20macqueenii_20[refseq_20GCF_5F000695195.1_202014-06-02] 59,693 sequences; 1,086,566,339 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq17777 154 2e-35 >seq17777 Length=755 Score = 154 bits (170), Expect = 2e-35 Identities = 170/221 (77%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 14 GGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACC 73 |||| || ||||||||||||| ||||| ||| |||||| |||||| ||||||| | | Sbjct 755 GGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAATT-CCTCGTTCACGGGG 698 Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTC 132 || ||||||||| | ||||||||||||| ||||| | ||||||| |||| | Sbjct 697 AAGAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCTGCC 638 Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192 ||| ||| | || | ||| ||||||||||||||||||||||| | |||||| Sbjct 637 GGCGGAGGGTAGGCACAAGCTGAGCCAGTCAGTGTAGCGCGCGTGCGGCCCCGGACATCT 578 Query 193 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||||||||||||||||||||||| ||||| || ||||| Sbjct 577 AAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751565136495