Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydotis_20macqueenii_20[refseq_20GCF_5F000695195.1_202014-06-02]
59,693 sequences; 1,086,566,339 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq42008 279 9e-73
seq51465 91.5 3e-16
>seq42008
Length=25164
Score = 279 bits (308), Expect = 9e-73
Identities = 184/204 (90%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| || | |||||||||||| ||| |||||||
Sbjct 280 TCATCAGTAGGGTAAAACTAACCTGTCTCACGATGATCTAAACCCAGCCCACATTCCCTA 339
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
|||||| |||||||||||||| ||| |||||||||||| |||||||||||||||||
Sbjct 340 TTAGTGAGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 399
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||| ||
Sbjct 400 TATCGAAGGATCAAAAAGTGACGTCGCTATGAATGCTTGGCCGCCACAAGCCAGTTACCC 459
Query 211 CTGTGGTAACTTTTCTGGCACCTC 234
||||||||||||||||| ||||||
Sbjct 460 CTGTGGTAACTTTTCTGACACCTC 483
>seq51465
Length=30238
Score = 91.5 bits (100), Expect = 3e-16
Identities = 64/72 (89%), Gaps = 2/72 (3%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| | |||||||||||||| | |||||||
Sbjct 13809 TCATCAGTAGGGTAAAACTAACCTGTCTCACAA--GTCTAAACCCAGCTGATGTTCCCTG 13752
Query 91 TTAGTGGGTGAA 102
|||||||| |||
Sbjct 13751 TTAGTGGGGGAA 13740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 853889983008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |