Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydotis_20macqueenii_20[refseq_20GCF_5F000695195.1_202014-06-02] 59,693 sequences; 1,086,566,339 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq42008 279 9e-73 seq51465 91.5 3e-16 >seq42008 Length=25164 Score = 279 bits (308), Expect = 9e-73 Identities = 184/204 (90%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| || | |||||||||||| ||| ||||||| Sbjct 280 TCATCAGTAGGGTAAAACTAACCTGTCTCACGATGATCTAAACCCAGCCCACATTCCCTA 339 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||| Sbjct 340 TTAGTGAGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 399 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||| || Sbjct 400 TATCGAAGGATCAAAAAGTGACGTCGCTATGAATGCTTGGCCGCCACAAGCCAGTTACCC 459 Query 211 CTGTGGTAACTTTTCTGGCACCTC 234 ||||||||||||||||| |||||| Sbjct 460 CTGTGGTAACTTTTCTGACACCTC 483 >seq51465 Length=30238 Score = 91.5 bits (100), Expect = 3e-16 Identities = 64/72 (89%), Gaps = 2/72 (3%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| | |||||||||||||| | ||||||| Sbjct 13809 TCATCAGTAGGGTAAAACTAACCTGTCTCACAA--GTCTAAACCCAGCTGATGTTCCCTG 13752 Query 91 TTAGTGGGTGAA 102 |||||||| ||| Sbjct 13751 TTAGTGGGGGAA 13740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853889983008