Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydotis_20macqueenii_20[refseq_20GCF_5F000695195.1_202014-06-02]
59,693 sequences; 1,086,566,339 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq42616 86.0 1e-14
seq28732 73.4 6e-11
>seq42616
Length=21112
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| | ||| |||| || |||| || || |
Sbjct 20682 GTACGAGAGGAACCGCAGA-TTCAGACCCCT-GGTGCGTGCGCTTGGCTGAGGAGCCACT 20739
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| || || |||||||||||| || ||||| |||||| ||| |||||||||||||
Sbjct 20740 GGCGTGAGGCTACCATCTGCGGGCTTATGACTGAACACCTTTAAGTCAGAATCC 20793
>seq28732
Length=16530
Score = 73.4 bits (80), Expect = 6e-11
Identities = 62/75 (83%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104
|| |||| || || || ||||| |||||| ||||| || ||||| |||||| |||||||
Sbjct 3037 TGGCTGAGGAGCCACTGGCGCGAGGCTACCGTCTGCGGGCTTATGACTGAACACCTCTAA 3096
Query 105 GTCAGAATCCATGCC 119
|||||||||| ||||
Sbjct 3097 GTCAGAATCC-TGCC 3110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 818726276352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |