Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq582 172 1e-40 seq241453 154 3e-35 seq222214 125 1e-26 seq2266 111 3e-22 seq7415 98.7 2e-18 seq178050 73.4 7e-11 >seq582 Length=2980 Score = 172 bits (190), Expect = 1e-40 Identities = 207/276 (75%), Gaps = 4/276 (1%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | | |||||||||| ||||||||||||| Sbjct 1584 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAGAAAATTAGAGTGT 1643 Query 98 TCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 |||||||||||| || | |||| ||| |||||||| ||||||||| | ||||| Sbjct 1644 TCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGGAATAATGGAATAGGAC-TCCGGTT 1702 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216 ||||||||||||||| | | || | |||||||| ||||| | |||||| | || Sbjct 1703 CTATTTTGTTGGTTTTCGGAAACGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGT 1762 Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 ||| | |||||||||||||||||| ||||| ||| |||||||| || Sbjct 1763 ATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGCCTAGAGCGAAAGCATT 1822 Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| |||||||||||||||| |||||||||| Sbjct 1823 TGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 1857 >seq241453 Length=467 Score = 154 bits (170), Expect = 3e-35 Identities = 203/276 (74%), Gaps = 4/276 (1%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| |||| |||| ||| || ||| | | |||||| ||| |||||||||| | Sbjct 118 ATGCTCTTAACTGAGTGTCCCGCGGGGCCCAAAGCGTTTACTGTGAGAAAATTAGAGGGG 177 Query 98 TCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 |||||||||||| || | |||| || |||||||| ||||||||| | ||||| Sbjct 178 TCAAAGCAGGCCGGCCGCCGGCATACTGGAGATAGGAATAATGGAATAGGAC-TCCGGTT 236 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216 ||||||||||||||| | | || | |||||||| ||||| | |||||| | || Sbjct 237 CTATTTTGTTGGTTTTCGGAAACGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGT 296 Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 ||| | |||||||||||||||||| ||||| ||| |||||||| || Sbjct 297 ATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGCCTAGAGCGAAAGCATT 356 Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| |||||||||||||||| |||||||||| Sbjct 357 TGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 391 >seq222214 Length=296 Score = 125 bits (138), Expect = 1e-26 Identities = 143/188 (76%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 59 CGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCG 117 ||||| | ||| | |||||||||| ||||||||||||||||||||||||| || | Sbjct 95 CGGGGCCCGAGG-CGTTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCGG 153 Query 118 AATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA 177 |||| ||| |||||||| ||||||||| | |||||||||||||||||||| | | Sbjct 154 CATACTGCAGCTAGGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTTTCGGAA 212 Query 178 CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237 || | |||||||| ||||| | |||||| | ||||| | |||||||||| Sbjct 213 ACGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAA 272 Query 238 TTCTTGGA 245 |||||||| Sbjct 273 TTCTTGGA 280 >seq2266 Length=3233 Score = 111 bits (122), Expect = 3e-22 Identities = 189/269 (70%), Gaps = 4/269 (1%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| |||| |||| || | ||| | | |||||||||| |||||| |||||| Sbjct 522 ATGCTCTTAACTGAGTGTCCCACAGGGCCCAAAGCATTTACTTTGAGAAAATTTGAGTGT 463 Query 98 TCAAAGCAGG-CCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 |||||||||| || ||| | | || ||| |||||| | || |||||| | ||| | Sbjct 462 TCAAAGCAGGCCCGCCGCTGGCACACTGCAGCTAGGAATAGTGGAGTAGGAC-TCCGGCT 404 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216 |||||||| ||| || | | | || | ||||| || ||||| || ||||| | || Sbjct 403 CTATTTTGATGGGTTTTGGAAACGGGGCCATGATAAAGAGGGAGAGCTGGGGGCATTCGT 344 Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 ||| || |||||||||||||||||| | |||| ||| |||||| || Sbjct 343 ATTGTGCTGCTAGAGGTGAAATTCTTGGACCGACGCAAGATGGCCTAGAATGAAAGCATT 284 Query 277 CACCAAGGATGTTTTCATTAATCAGTGAA 305 |||| |||||| ||||| ||| |||| Sbjct 283 TGACAAGAATGTTTGCATTATTCA-TGAA 256 >seq7415 Length=301 Score = 98.7 bits (108), Expect = 2e-18 Identities = 122/163 (75%), Gaps = 3/163 (2%) Strand=Plus/Minus Query 49 CTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG 107 ||||||| ||| || ||| | | | |||||||||| |||||||| ||||||||||| || Sbjct 177 CTGGGTGGCCCGCGGGGCCCGAAGCGTTTACTTTGAGAAAATTAGGGTGTTCAAAGCGGG 118 Query 108 CC-TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTT 166 || || | |||| || |||||||| ||||||||| | |||||||| |||||| Sbjct 117 CCGGCCGCCGGCATACTGCAGTTAGGAATAATGGAATAGGAC-TCCGGTTCTAGTTTGTT 59 Query 167 GGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGG 209 ||||| | | || | |||||||| ||||| | |||||| Sbjct 58 GGTTTTCGGAAACGGGGCCATGATTAAGAGGGACGGCCGGGGG 16 >seq178050 Length=301 Score = 73.4 bits (80), Expect = 7e-11 Identities = 82/107 (77%), Gaps = 2/107 (2%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | | |||||||||| ||||||||||||| Sbjct 107 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAGAAAATTAGAGTGT 48 Query 98 TCAAAGCAGGCC-TTTGCTCGAATACATTAGCATGGAATAATAGAAT 143 |||||||||||| || | |||| ||| |||||||| |||| Sbjct 47 TCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGGAATAATGGAAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 910574405312