Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1078 342 9e-92 seq218545 329 5e-88 seq63782 179 6e-43 seq35875 176 8e-42 seq278196 145 1e-32 seq286741 143 5e-32 seq76697 129 1e-27 seq269671 95.1 2e-17 seq400027 91.5 3e-16 seq181158 84.2 4e-14 seq52357 80.6 5e-13 seq81760 75.2 2e-11 >seq1078 Length=2020 Score = 342 bits (378), Expect = 9e-92 Identities = 253/294 (86%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 1345 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 1286 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1285 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 1226 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1225 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 1166 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 1165 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 1106 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | | |||||||| ||||| | |||||| ||| ||||||| Sbjct 1105 TAAAACCCAAAAAGCCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 1052 >seq218545 Length=535 Score = 329 bits (364), Expect = 5e-88 Identities = 250/294 (85%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 534 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 475 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 474 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 415 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 414 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 355 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| || Sbjct 354 TGAACGCTTGGCCGCCACAAGCCAGTTAACCCTGTGGTAACTTTTCTGACACCTCCTGCT 295 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | | |||||||| ||||| | |||||| ||| ||| || Sbjct 294 TAAAACCCAAAAAGCCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCCGTACTC 241 >seq63782 Length=365 Score = 179 bits (198), Expect = 6e-43 Identities = 114/124 (92%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 109 AACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAG 168 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 130 AACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAG 71 Query 169 CAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGG 228 | ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct 70 CGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATGCCTGTGGTAACTTTTCTGA 11 Query 229 CACC 232 |||| Sbjct 10 CACC 7 >seq35875 Length=301 Score = 176 bits (194), Expect = 8e-42 Identities = 193/257 (75%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 ||||| ||| ||||| ||| || | ||||||| || |||| || | ||| || Sbjct 5 CAGTATGGTGAAACTCGACTGAGCCAGGGGGGTCTAACAACACTTCACTTTACGTATGAG 64 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||| || | || ||| ||| | |||| | ||||| | ||||||||||||||||| | Sbjct 65 TGGTTGCAGAAGCCAGCGCCTGGTGAATCCCGCTTCTAAAGGATAGGAAGAGCCGACAAC 124 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 |||||||||||| || ||||||||||||| ||||||| |||||||||||||||||| || Sbjct 125 GAAGGATCAAAAGGCGACGTCGCTATGAAGGCTTGGCAGCCACAAGCCAGTTATCCAGGT 184 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCAC 274 || || ||||||| |||||| || | ||| | | | |||||||| ||||||| Sbjct 185 GGGAAATTTTCTGACACCTCCTGCTTAAAACCCAAAAAGCCAGAAGGATCGTGAGGCCAC 244 Query 275 ACTTTCATGGTTTGTAT 291 |||||| ||| ||||| Sbjct 245 GCTTTCACGGTCTGTAT 261 >seq278196 Length=290 Score = 145 bits (160), Expect = 1e-32 Identities = 163/217 (75%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || |||||||||||||| |||||||||||||| Sbjct 19 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTACAACTAACCTGTCTC 78 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||| ||||||||||||| ||||| ||||| |||||| ||| ||||||||| | Sbjct 79 ACGACGGTCCAAACCCAGCTCACCTTCCCCATTAGGGGGTGACCAAGCCAACGCTTGGTG 138 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||| ||||| | |||| | ||||| | ||| | || ||| | || |||| | Sbjct 139 AATTCCGCTTCACAAGTCTAGGCACCACCGACCACCAAGCAACACAAATCGACCTCGCCA 198 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 || |||||||| |||| |||| || |||| || Sbjct 199 AGACCGCTTGGCCCACACACGCCACCTACGCCTGCGG 235 >seq286741 Length=346 Score = 143 bits (158), Expect = 5e-32 Identities = 117/142 (82%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||| Sbjct 1 ATCGAAGGATCAAAAAGCGACGTGACTATGAACGCTTGGCCGCCACAAGCCAGTTATCCC 60 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||||||||||||||| |||||| || | ||| | | | |||||||| |||| Sbjct 61 TGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGCCAGAAGGATCGTGAGGC 120 Query 272 CACACTTTCATGGTTTGTATTC 293 | | |||||| ||| ||||||| Sbjct 121 CCCGCTTTCACGGTCTGTATTC 142 >seq76697 Length=63410 Score = 129 bits (142), Expect = 1e-27 Identities = 158/214 (74%), Gaps = 5/214 (2%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||| ||| |||||||||| ||||||||| | ||||||| ||||| | |||| | Sbjct 22476 TCATCAGGAGGATAAAACTAACTTGTCTCATGGCAGTCTAAATCCAGCACGTGTTCATTG 22535 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||| ||||||||| ||||| ||| |||||||| || ||| ||||| ||| || Sbjct 22536 TTAATGGGTGAACCGACCAACACTTGGTGAATTCTGTTTTCTGGTGACAGGAAAAGCTGA 22595 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||| |||| | || | ||||| |||| | |||| |||| || | ||| || Sbjct 22596 CATCAAAGGGTTGAA--GTAACGTTGCTAATA---CTTGACTGCTGCAGGGTGGTTTTCT 22650 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 ||||||||||||||||| || |||| || | ||| Sbjct 22651 CTGTGGTAACTTTTCTGACATCTCTTGCTTAAAA 22684 >seq269671 Length=5876 Score = 95.1 bits (104), Expect = 2e-17 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||| ||||||||| |||||||||| || |||||||||||||||| |||||||| Sbjct 1093 TCATCAGTAAGGTAAAACTGACCTGTCTCACAACAGTCTAAACCCAGCTCATGTTCCCTA 1034 Query 91 TTAGTGGGTGAA 102 |||||| | ||| Sbjct 1033 TTAGTGAGGGAA 1022 >seq400027 Length=7047 Score = 91.5 bits (100), Expect = 3e-16 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||| | ||||||| || |||||||| ||||||||||| || Sbjct 569 TCATCAGTAGGGTAAAACTGCCATGTCTCACGATGGTCTAAAACCAGCTCACGTAACCGG 628 Query 91 TTAGTGGGTGAACAATCCAA 110 ||||||||||||| || ||| Sbjct 629 TTAGTGGGTGAACTATTCAA 648 >seq181158 Length=11547 Score = 84.2 bits (92), Expect = 4e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCA 81 |||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 8328 TCATCAGTAGGGTAAAACTAACCTGTCTCACGATGGTCTAAACCCAGCTCA 8278 >seq52357 Length=15717 Score = 80.6 bits (88), Expect = 5e-13 Identities = 64/76 (84%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 48 CTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATC 107 || |||||||||| || ||| ||| |||||||||| ||| |||||||||||||||||||| Sbjct 1059 CTCACCTGTCTCACGATGGTGTAA-CCCAGCTCACATTCTCTATTAGTGGGTGAACAATC 1117 Query 108 CAACGCTTACCGAATT 123 || |||| ||||| Sbjct 1118 CAGTGCTTGGTGAATT 1133 >seq81760 Length=330 Score = 75.2 bits (82), Expect = 2e-11 Identities = 61/73 (84%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 258 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 317 Query 60 ATGACGGTCTAAA 72 | ||||||||||| Sbjct 318 ACGACGGTCTAAA 330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 850081700064