Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq582 95.1 1e-17 seq222214 91.5 2e-16 seq241453 73.4 5e-11 seq7415 73.4 5e-11 >seq582 Length=2980 Score = 95.1 bits (104), Expect = 1e-17 Identities = 143/193 (74%), Gaps = 8/193 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||| ||| |||| | |||| Sbjct 1717 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCAGTATGCCGGCG 1659 Query 70 TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCACA 127 | |||||||||||||||||||||||||||| ||||| | | | || || | | ||| Sbjct 1658 GCCGGCCTGCTTTGAACACTCTAATTTTCTCAAAGTAAACGCTTCGGGCCCCGCGGGACA 1599 Query 128 C-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTCGC 182 | || ||| |||| ||| | || ||||| | |||||||| | || || ||||| Sbjct 1598 CTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTCGC 1539 Query 183 CGTGAGGCGGACC 195 | | |||||||| Sbjct 1538 CTCGCGGCGGACC 1526 >seq222214 Length=296 Score = 91.5 bits (100), Expect = 2e-16 Identities = 81/99 (82%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||| ||| |||| | |||| Sbjct 206 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCAGTATGCCGGCG 148 Query 70 TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||||||||||||||||||||||||||| ||||| Sbjct 147 GCCGGCCTGCTTTGAACACTCTAATTTTCTCAAAGTAAA 109 >seq241453 Length=467 Score = 73.4 bits (80), Expect = 5e-11 Identities = 77/99 (78%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||| || |||| | |||| Sbjct 251 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTATCTCCAGTATGCCGGCG 193 Query 70 TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||||||||| | |||||||||||||| ||||| Sbjct 192 GCCGGCCTGCTTTGACCCCTCTAATTTTCTCACAGTAAA 154 >seq7415 Length=301 Score = 73.4 bits (80), Expect = 5e-11 Identities = 77/99 (78%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||| ||| || | ||||||||| |||||||| || |||| | |||| Sbjct 54 AAACCAACAAACTAGAACCGGA-GTCCTATTCCATTATTCCTAACTGCAGTATGCCGGCG 112 Query 70 TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || ||||||||||| ||||||||||||| ||||| Sbjct 113 GCCGGCCCGCTTTGAACACCCTAATTTTCTCAAAGTAAA 151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592285754046