Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq222214 91.5 2e-16 seq582 91.5 2e-16 seq241453 78.8 9e-13 seq2266 78.8 9e-13 >seq222214 Length=296 Score = 91.5 bits (100), Expect = 2e-16 Identities = 127/174 (73%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| || | |||| | | || Sbjct 109 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGG 168 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | ||||| Sbjct 169 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACGGGGCCATGATT 226 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 227 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 280 >seq582 Length=2980 Score = 91.5 bits (100), Expect = 2e-16 Identities = 127/174 (73%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| || | |||| | | || Sbjct 1620 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGG 1679 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | ||||| Sbjct 1680 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACGGGGCCATGATT 1737 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 1738 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 1791 >seq241453 Length=467 Score = 78.8 bits (86), Expect = 9e-13 Identities = 124/174 (71%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||| ||| |||||||||| | |||||||||||| || | |||| | || Sbjct 154 TTTACTGTGAGAAAATTAGAGGGGTCAAAGCAGGCCGGCCGCCGGCATACTGGAGATAGG 213 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | ||||| Sbjct 214 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACGGGGCCATGATT 271 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 272 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 325 >seq2266 Length=3233 Score = 78.8 bits (86), Expect = 9e-13 Identities = 124/174 (71%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGG-CCTTTGCTCGAATACATTACCATGG 71 |||||||||| |||||| ||| |||||||||||| || ||| | | || | | || Sbjct 486 TTTACTTTGAGAAAATTTGAGTGTTCAAAGCAGGCCCGCCGCTGGCACACTGCAGCTAGG 427 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||| | || |||||| | ||| ||||||||| || || | | | || | |||||| Sbjct 426 AATAGTGGAGTAGGAC-TCCGGCTCTATTTTGATGGGTTTTGGAAACG-GGGCCATGATA 369 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| || ||||| | ||||| || | |||||||||||||||| Sbjct 368 AAGAGGGAGAGCTGGGGGCATTCGTATTGTGCTGCTAGAGGTGAAATTCTTGGA 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509493121760