Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq582 197 3e-48 seq150526 170 4e-40 seq141357 168 1e-39 seq273654 154 3e-35 seq336636 145 1e-32 seq294651 89.7 1e-15 seq15332 77.0 6e-12 seq186094 75.2 2e-11 >seq582 Length=2980 Score = 197 bits (218), Expect = 3e-48 Identities = 201/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 2256 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 2313 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||||||||||||||||||||||| | || | || | | Sbjct 2314 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 2373 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | || | | ||||| ||||||| | | |||| Sbjct 2374 CCTCCGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 2433 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 2434 CAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 2493 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 2494 AAGTCCCTGCCCTTTGTA 2511 >seq150526 Length=594 Score = 170 bits (188), Expect = 4e-40 Identities = 195/258 (76%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||| | ||| | |||| || ||| || ||| |||||||| ||| Sbjct 325 CTTCTTAGAGGGAGAAGTGGCGTGCAGCCACCCGAGGTT-GAT-CAAAAACAGGTCAGTG 382 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||||||||||||||| ||| ||| | || | || | | Sbjct 383 ATGCCCTTAGATGTCCCGGGCCGCACGCGCGCTCCACCGACTGGCTCAGCTTGTGCCTAC 442 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | || | | ||||| ||||||| | | |||| Sbjct 443 CCTCCGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 502 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 503 CAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 562 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 563 AAGTCCCTGCCCTTTGTA 580 >seq141357 Length=302 Score = 168 bits (186), Expect = 1e-39 Identities = 194/257 (75%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 279 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 222 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||||||||||||||||||||||| | || | || | | Sbjct 221 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 162 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| || |||||| | | || | | ||||||||||||| | | ||| Sbjct 161 CCTCCGCCGGCCGGCGCGGGTAACCCGTTGAACCCCCTTCGTGCTGGGGATCGGGGGTTG 102 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 | ||| | | | ||||||||| || || ||| || ||| |||| ||| | |||||| | Sbjct 101 CCATTCCTCCCCGTCAACGAGGCATTCCCAGTCAGTGCGGGTCACAAGCTCCCGTTGACT 42 Query 311 ACGTCCCTGCCCTTTGT 327 ||||||||||||||||| Sbjct 41 ACGTCCCTGCCCTTTGT 25 >seq273654 Length=673 Score = 154 bits (170), Expect = 3e-35 Identities = 193/258 (75%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 551 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 494 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||||||||||||||||||||||| | ||| | || | | Sbjct 493 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCCCAGCTTGTGCCTAC 434 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTC-GTGCTGGGGATAGAGCATT 249 ||| ||||| ||| |||||| | ||| ||| | || ||| ||||||| | | ||| Sbjct 433 CCTCCGCCGGCAGGCGCGGGTAACCC-GTTGAACCCCCTCCGTGATGGGGATCGGGGATT 375 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 ||| || | | | | |||| || || || || || ||| ||| | || ||||||| | Sbjct 374 GCACTTCCTCCCCGTGAACGCGGGATTCCCCGTCAGTGCGGGTCCTACGCCCGCGTTGCT 315 Query 310 TACGTCCCTGCCCTTTGT 327 || | ||||||||||||| Sbjct 314 TAAGGCCCTGCCCTTTGT 297 >seq336636 Length=550 Score = 145 bits (160), Expect = 1e-32 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||| | |||||||||||||||||||||||| | || | || | | ||| ||| Sbjct 1 AGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTACCCTCCGCC 60 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 || ||| |||||| | | || | | ||||| ||||||| | | ||||||||| || Sbjct 61 GGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAATTCTT 120 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 | | | |||||||||| || |||||| ||| ||||| ||| ||||||||||| |||||| Sbjct 121 CCCCGTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCCCGCGTTGATTAAGTCCCT 180 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 181 GCCCTTTGTA 190 >seq294651 Length=345 Score = 89.7 bits (98), Expect = 1e-15 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 |||||||||||||||||||| |||||||||| | ||||| ||| | | |||||||||| | Sbjct 89 GCAATAACAGGTCTGTGATGTCCTTAGATGTCCAGGGCCACACACACACTACACTGACTG 148 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 || | || | | || ||| | ||| ||||||| | | || | | || | Sbjct 149 GCACAGCTTGTGCCTACACTCCGCCAGCCGGTGTGGGTAACCCACTGAACCACATTCACG 208 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 ||||||| | | | ||||||| | | | | ||| |||||| | |||||| | | || Sbjct 209 ATGGGGATTGGGAACTGCAATTCATTCCCGTGAACAAGGAATTCTAAGTAAGTGTGGGTA 268 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || || | | ||| ||||||||||||||| Sbjct 269 ATAAGATCAC----CTTAAATCCCTGCCCTTTGTA 299 >seq15332 Length=301 Score = 77.0 bits (84), Expect = 6e-12 Identities = 66/82 (80%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||||||| || | | | |||| ||||| || |||||| ||| ||||| || |||||| Sbjct 229 ATTGCAATCCTTCCCCGTGAACGGGGAATTCCCAGTAAGTGCGGGTCATAAGGTCGCGTT 170 Query 307 GATTACGTCCCTGCCCTTTGTA 328 ||||| ||||| |||||||||| Sbjct 169 GATTAAGTCCCGGCCCTTTGTA 148 >seq186094 Length=558 Score = 75.2 bits (82), Expect = 2e-11 Identities = 77/97 (79%), Gaps = 3/97 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| ||||||||||||||| Sbjct 219 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTC 276 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACAC 167 ||||||| |||||| | |||||||||||| || ||| Sbjct 277 ATGCCCTCAGATGTCCGCGGCCGCACGCGCCCTCCAC 313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 942412671232