Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_011356.1 Length=54896 Score E Sequences producing significant alignments: (Bits) Value seq354460 738 0.0 seq291134 437 3e-118 seq237293 129 2e-25 seq404959 100 1e-16 seq243231 96.9 1e-15 >seq354460 Length=442 Score = 738 bits (818), Expect = 0.0 Identities = 429/442 (97%), Gaps = 0/442 (0%) Strand=Plus/Minus Query 5692 CCTGGGCCATGTAAGCCGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 5751 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 442 CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 383 Query 5752 CCCGGGAGGTAAACGGGCATTTCAGCTCAAGGCCATTGCCGTCACTGCATAAACCATCGG 5811 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 382 CCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 323 Query 5812 GAGAGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 5871 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 322 GAGAGCAAGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 263 Query 5872 CGCCGGAAGTGAACTCAAAGAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 5931 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 262 CGCCGGAAGTGAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 203 Query 5932 GTGCTTTAGCGTTAACTTCCGGAGCCACACCGGTGCAAACCTCGGCAAGCAGGGTGTGGA 5991 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 202 GTGCTTTAGCGTTAACTTCCGGAGCCACCCCGGTGCAAACCTCAGCAAGCAGGGTGTGGA 143 Query 5992 AGTAGGACATTTTCATGTCAGGCCATTTCTTTCCTGAGCGGGGTTTTGCTATCACGTTGT 6051 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 142 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCGGAGCGGGGTTTTGCTATCACGTTGT 83 Query 6052 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCATGCATCATCCCCCTGTT 6111 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 82 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCCCCCTGTT 23 Query 6112 CGACAGCTCTCACGTCGATTCC 6133 ||||||||||||| ||||| || Sbjct 22 CGACAGCTCTCACATCGATCCC 1 >seq291134 Length=410 Score = 437 bits (484), Expect = 3e-118 Identities = 343/410 (84%), Gaps = 0/410 (0%) Strand=Plus/Plus Query 43914 GGCTGCGGGCAGAAATGCAGGGGGAGATTGTGGCACTGGTCCACAGTCATCCCGGTGGTC 43973 |||||| |||||||| |||||| ||||||||||| ||||||||||| || |||||||||| Sbjct 1 GGCTGCAGGCAGAAAGGCAGGGTGAGATTGTGGCGCTGGTCCACAGCCACCCCGGTGGTC 60 Query 43974 TGCCCTGGCTGAGCGAGGCCGACCGGCGGCTGCAGATAAAAAGTGCACTGTCCTGGTGGC 44033 ||||||||||||| ||||||||||||||||||||| | | |||| || | ||||||| Sbjct 61 TGCCCTGGCTGAGTGAGGCCGACCGGCGGCTGCAGGTGCAGAGTGATTTGCCGTGGTGGC 120 Query 44034 TGGTCTGCCGGGGGGAAATTCATAAATTCCGCTGTGTGCCACATCTGACAGGACGGCGCT 44093 |||||||||||||| |||||||| |||||||||||||| ||||| || || ||||||| Sbjct 121 TGGTCTGCCGGGGGACGATTCATAAGTTCCGCTGTGTGCCGCATCTCACCGGGCGGCGCT 180 Query 44094 TTGAGCACGGGGTGACGGACTGTTACACGCTGTTCCGGGATGCCTACCATCTGGCGGGAA 44153 |||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||| | Sbjct 181 TTGAGCACGGTGTGACGGACTGTTACACACTGTTCCGGGATGCTTATCATCTGGCGGGGA 240 Query 44154 TTGATATGCCGGATTTTGAGCGTGAGGATGACTGGTGGCGTAACGGTCAGAACCTTTACC 44213 |||| |||||||| ||| | || ||||||||||||||||||||||| ||||| || | Sbjct 241 TTGAGATGCCGGACTTTCATCGGGAGGATGACTGGTGGCGTAACGGCCAGAATCTCCATA 300 Query 44214 TGGACAATATGGCGGTCACCGGCTTTTACCGGGTGCCCCTGTCCTCTGCACAGGCGGGCG 44273 |||| ||| ||| || || || | || | |||||| |||| | |||||| |||||| Sbjct 301 TGGATAATCTGGAGGCGACGGGGCTGTATCAGGTGCCGTTGTCAGCGGCACAGCCGGGCG 360 Query 44274 ATATCCTGCTGTGCTGCTTTGGCGCATCGGTGGCCAATCATGCCGCCATT 44323 || | ||||||||||| ||||| |||| ||| | ||||| ||||| ||| Sbjct 361 ATGTGCTGCTGTGCTGTTTTGGTTCATCAGTGCCGAATCACGCCGCAATT 410 >seq237293 Length=409 Score = 129 bits (142), Expect = 2e-25 Identities = 74/76 (97%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 14360 ATGACCATCTACATCACTGGGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 14419 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 353 ATGACCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 294 Query 14420 TGGGGGAGAGGGAAGT 14435 |||||||||||||||| Sbjct 293 TGGGGGAGAGGGAAGT 278 >seq404959 Length=455 Score = 100 bits (110), Expect = 1e-16 Identities = 75/88 (85%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 52353 CACCTCGTATGCAAGAACGTACTGCGGTTGGTTGGTGAACTTTCGATAGTGCTAGTCTTG 52412 ||| ||||||||| |||||| |||||| ||| |||||||||| ||||||||| || ||| Sbjct 373 CACGTCGTATGCAGGAACGTGCTGCGGCTGGCTGGTGAACTTCCGATAGTGCGGGTGTTG 314 Query 52413 GATGATTTCCAGCCGTTACCGATTTTAC 52440 ||||||||||| | |||||||||||| Sbjct 313 AATGATTTCCAGTTGCTACCGATTTTAC 286 >seq243231 Length=365 Score = 96.9 bits (106), Expect = 1e-15 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 18859 ACAGTCAGAAAATACATTGGCGATAAAGAAGGGAAAAAGCACGCCGTCGTCAATGGCGTC 18918 || |||||||||||| ||| |||||||| ||||||| ||||||| ||||||| | ||| Sbjct 6 ACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACGACGTT 65 Query 18919 CTTATGGTTCATCGCGGATGG-GGTAAAGA 18947 || || ||||||||||||||| || ||||| Sbjct 66 CTCATCGTTCATCGCGGATGGAGGGAAAGA 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 174492001530924