Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Columba_20livia_20[refseq_20GCF_5F000337935.1_202013-02-11] 14,923 sequences; 1,107,989,085 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq5372 77.0 3e-12 >seq5372 Length=213 Score = 77.0 bits (84), Expect = 3e-12 Identities = 119/166 (72%), Gaps = 3/166 (2%) Strand=Plus/Minus Query 21 GAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGGAATAATAG 79 || |||||||||| |||||||||||||| || | |||| | | |||||||| | Sbjct 213 GAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGGAATAATGG 154 Query 80 AATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGA 139 |||||||| | |||||||||||||| ||||| | ||| | ||||| || | ||| Sbjct 153 AATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACGGGGCCATGATTAAGAGGGA 96 Query 140 TAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | |||||| | ||||| | | |||||||||||||||| Sbjct 95 CGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 50 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511925981920