Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Corvus_20brachyrhynchos_20[refseq_20GCF_5F000691975.1_202014-06-02]
10,547 sequences; 1,091,312,783 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1412 118 4e-24
seq697 77.0 1e-11
>seq1412
Length=7078826
Score = 118 bits (130), Expect = 4e-24
Identities = 122/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||| | |||| ||||||||||||| | || || |||||| | | ||||| |||||||
Sbjct 7068860 GAGTTGGGTTGCTTGGGAATGCAGCCCAAAGCAGGTGGTAAACTCCATCTAAGGCTAAAT 7068919
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| |||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 7068920 ACCGGCACGAGACCGATAGCCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 7068979
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 7068980 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 7069019
>seq697
Length=10596748
Score = 77.0 bits (84), Expect = 1e-11
Identities = 74/95 (78%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 76 GGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGAT 135
|||||| | | ||||| |||||||| |||| |||||||||||| ||||||| || |
Sbjct 4209747 GGTAAACTCCATCTAAGGCTAAATACTGGCACGAGACCGATAGCCAACAAGTACCGTAAG 4209806
Query 136 CGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAA 170
||||| || |||| ||||| | |||||||| ||
Sbjct 4209807 GGAAAGTTGGAAAGAGCTTTGAAGAGAGAGTTCAA 4209841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079773766850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |