Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corvus_20brachyrhynchos_20[refseq_20GCF_5F000691975.1_202014-06-02] 10,547 sequences; 1,091,312,783 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq3784 87.8 2e-15 >seq3784 Length=2528729 Score = 87.8 bits (96), Expect = 2e-15 Identities = 132/180 (73%), Gaps = 16/180 (9%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| ||||| |||| |||||||||||||| ||| | |||| | | || Sbjct 2330990 TTTACTTTGAGAAAATCAGAGTGTTCAAAGCAGGCCGGCCGCTGGCATACTGCAGCTAGG 2331049 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||| ||||||| |||||| || | || | ||||| Sbjct 2331050 AATAATGGAATAGGAC-TCCGGTTCCATTTTGTTGGTTTC-AGAAACG-GGGCCATGATT 2331106 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCA-ATTGT-----CAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| ||||| | |||||||||||||||| Sbjct 2331107 AAGAGGGA-CGGCGGGGG-----GCATTCATATTGTGCCGCTAGAGGTGAAATTCTTGGA 2331160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511947686880