Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Corvus_20brachyrhynchos_20[refseq_20GCF_5F000691975.1_202014-06-02]
10,547 sequences; 1,091,312,783 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq2879 91.5 2e-16
seq8320 78.8 2e-12
>seq2879
Length=24416
Score = 91.5 bits (100), Expect = 2e-16
Identities = 86/107 (80%), Gaps = 2/107 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | ||||||| | | ||| |||| || |||| || || |
Sbjct 11738 GTACGAGAGGAACCGCAGG-TTCAGAACACT-GGTGCGTGCGCTTGGCTGAGGAGACACT 11795
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTC 107
| ||||| |||||||||||| || ||||| |||||||||||||||||
Sbjct 11796 GGCGCGAGGCTACCATCTGCGGGCTTATGACTGAACGCCTCTAAGTC 11842
>seq8320
Length=393
Score = 78.8 bits (86), Expect = 2e-12
Identities = 54/61 (89%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| || || ||||| |||||||||||| || ||||| |||||||||||||||||||||||
Sbjct 391 AGCCACTGGCGCGAGGCTACCATCTGCGGGCTTATGACTGAACGCCTCTAAGTCAGAATC 332
Query 114 C 114
|
Sbjct 331 C 331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819116299008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |