Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corvus_20cornix_20cornix_20[refseq_20GCF_5F000738735.2_202017-03-08] 113 sequences; 1,042,281,180 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq84 138 2e-30 >seq84 Length=38542577 Score = 138 bits (152), Expect = 2e-30 Identities = 183/246 (74%), Gaps = 16/246 (7%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC-TTTGCTCGAATACATTAGCATGG 132 |||||||||| ||||| ||||||||||||||||||| ||| | ||| ||| || Sbjct 197850 TTTACTTTGAGAAAATCAGAGTGTTCAAAGCAGGCCGGCCGCTGGCTTACTGCAGCTAGG 197791 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 |||||| ||||||||| | |||||| |||||||||||||| || | || | ||||||| Sbjct 197790 AATAATGGAATAGGAC-TCCGGTTCCATTTTGTTGGTTTC-AGAAACGGGGCCATGATTA 197733 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCA-ATTGT-----CAGAGGTGAAATTCTTGGAT 246 | ||||| | |||||| | ||||| ||||| |||||||||||||||||| Sbjct 197732 AGAGGGA-CGGCGGGGG-----GCATTCATATTGTGCCTCTAGAGGTGAAATTCTTGGAC 197679 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 |||| ||| || ||||| || ||||| |||||||||||||||| ||| Sbjct 197678 CGGCACAAGATGGCCTAGCGCAAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAAT 197620 Query 307 GAAAGT 312 |||||| Sbjct 197619 GAAAGT 197614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198965824