Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coturnix_20japonica_20[refseq_20GCF_5F001577835.1_202016-03-01] 2,012 sequences; 927,656,957 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1037 116 2e-23 >seq1037 Length=47415 Score = 116 bits (128), Expect = 2e-23 Identities = 120/156 (77%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTG-TTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAA 98 |||||| |||| |||||||||||||| | || ||| |||||| | | ||||| |||||| Sbjct 16148 GAGTCGGGTTGCTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAA 16089 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || ||| |||||||||||| ||||||| || |||| ||||||| |||||| | Sbjct 16088 TACCGGCATGAGACCGATAGCCAACAAGTACCGTAGGGGAAATTTGAAAAGAACTTTGAA 16029 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGG 194 |||||||| || || ||||||| ||| | |||| Sbjct 16028 GAGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGG 15993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079956842600