Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cuculus_20canorus_20[refseq_20GCF_5F000709325.1_202014-06-17] 14,930 sequences; 1,153,894,225 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq4968 96.9 1e-14 >seq4968 Length=221 Score = 96.9 bits (106), Expect = 1e-14 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | ||| | |||||| || ||||||||||||| |||||| || ||||||| Sbjct 129 CTCCTTGAGGCGGGGGACGCCCAGCGTGACGTTCTTGGCCGAGACGCCCGCGTAGTGGAA 188 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCC 349176 ||| | |||||||| ||||||| |||||||| Sbjct 189 GGTGTTGAGGGTCATCTGCGTGGCCGGCTCGCC 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084330682324140