Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1476 324 2e-86 seq1472 300 3e-79 seq903 295 1e-77 seq338 190 3e-46 seq2405 150 3e-34 seq755 102 1e-19 seq1772 98.7 2e-18 seq1313 73.4 7e-11 >seq1476 Length=1991493 Score = 324 bits (358), Expect = 2e-86 Identities = 194/204 (95%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 392223 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 392282 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 392283 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 392342 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 392343 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 392402 Query 211 CTGTGGTAACTTTTCTGGCACCTC 234 ||||||||||||||||| |||||| Sbjct 392403 CTGTGGTAACTTTTCTGACACCTC 392426 >seq1472 Length=9377282 Score = 300 bits (332), Expect = 3e-79 Identities = 189/204 (93%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||| Sbjct 6120177 TCATCAGTAGGGTAAAACTAACCTGTCTCACGATGGTCTGATCCCAGCTCACGTTCCCTA 6120118 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||| | Sbjct 6120117 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCAA 6120058 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||| Sbjct 6120057 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGTCAGTTATCC 6119998 Query 211 CTGTGGTAACTTTTCTGGCACCTC 234 ||||||||||||||||| |||||| Sbjct 6119997 CTGTGGTAACTTTTCTGACACCTC 6119974 >seq903 Length=1157830 Score = 295 bits (326), Expect = 1e-77 Identities = 223/263 (85%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct 983183 TCATCAGTAGGGTAAAACTAACCTATCTCATGATGGTCTAAACCCAGCTCATGTTCCCTA 983242 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||| |||||| |||| ||||||||||| ||||||||||||||| | Sbjct 983243 TTAGTGGGTGAACGATCCAATGCTTGGTTAATTCTGCTTCACAATGATAGGAAGAGCCAA 983302 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| | || |||||||||||||||| |||||||||||||||||| Sbjct 983303 CATCGAAGGATCAAAAAGCGATGTTGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 983362 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| || | ||| | | | ||||||| ||| Sbjct 983363 CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGCCAGTAGGATCGTGAGG 983422 Query 271 CCACACTTTCATGGTTTGTATTC 293 || |||||| ||| ||||||| Sbjct 983423 CCCTGCTTTCACGGTCTGTATTC 983445 >seq338 Length=5814547 Score = 190 bits (210), Expect = 3e-46 Identities = 139/160 (87%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||| |||||||||||||||||| |||| || | ||||| |||||||||||||||||| Sbjct 1911616 TCATCACTAGGGTAAAACTAACCTGCCTCACGATGATCTAA-CCCAGCTCACGTTCCCTA 1911674 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||| || |||||||||||| |||||||||||||| | Sbjct 1911675 TTAGTGGGTGAACAATCCAATAGTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCTAA 1911734 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 190 ||| |||||||||||| ||||| |||||||||| |||||| Sbjct 1911735 CATTGAAGGATCAAAAGGCAACATCGCTATGAATGCTTGG 1911774 >seq2405 Length=7677052 Score = 150 bits (166), Expect = 3e-34 Identities = 91/96 (95%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 4453294 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 4453353 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTG 126 |||||||||| |||||||||||||| |||||||| Sbjct 4453354 TTAGTGGGTGGACAATCCAACGCTTGGTGAATTCTG 4453389 >seq755 Length=2966004 Score = 102 bits (112), Expect = 1e-19 Identities = 79/93 (85%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||||||| ||||| | || ||| |||| ||||| |||| || Sbjct 475864 TCATCAGTAGGGTAAAACTAACCTGCCTCATTATAGTGTAA-CCCAACTCACATTCCATA 475922 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATT 123 ||||||||||||||||||| | ||| ||||| Sbjct 475923 TTAGTGGGTGAACAATCCAGCACTTGGTGAATT 475955 >seq1772 Length=925147 Score = 98.7 bits (108), Expect = 2e-18 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||| | || |||||||||||||||| ||||| || Sbjct 50176 TCATCAGTAGGGTAAAACTAACCTGTCTTACAACAGTCTAAACCCAGCTCATGTTCCTTA 50235 Query 91 TTAGTGGGTGAA 102 |||||||| ||| Sbjct 50236 TTAGTGGGGGAA 50247 >seq1313 Length=2066833 Score = 73.4 bits (80), Expect = 7e-11 Identities = 54/62 (87%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||| ||||||||||||||| ||| | ||||| ||||||||||||||||||| Sbjct 1416783 TCATCAGTAAGGTAAAACTAACCTGCATCACAATGGTCT-AACCCAGCTCACGTTCCCTC 1416725 Query 91 TT 92 || Sbjct 1416724 TT 1416723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854299257696