Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1640 197 3e-48 >seq1640 Length=2360 Score = 197 bits (218), Expect = 3e-48 Identities = 201/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 1829 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 1772 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||||||||||||||||||||||| | || | || | | Sbjct 1771 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 1712 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | || | | ||||| ||||||| | | |||| Sbjct 1711 CCTCCGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 1652 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 1651 CAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 1592 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 1591 AAGTCCCTGCCCTTTGTA 1574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947088315648