Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq14354 143 5e-32 seq24876 78.8 2e-12 >seq14354 Length=78150 Score = 143 bits (158), Expect = 5e-32 Identities = 200/275 (73%), Gaps = 4/275 (1%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| | | | ||| | | | |||||||||| |||||| |||||| Sbjct 28903 ATGCTCTTAGCTGAGTGTCCTGCAGGGCCTGAAGCGTTTACTTTGAGAAAATTTGAGTGT 28962 Query 98 TCAAAGCAGGCC-TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 |||||||||||| |||| | |||| ||| |||||||| ||||||||| | ||||| Sbjct 28963 TCAAAGCAGGCCGGCTGCTGGCATACTGCAGCTAGGAATAATGGAATAGGAC-TCCGGTT 29021 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216 | |||||| |||||| | | | | | |||||||| |||||| | ||||| | | Sbjct 29022 CGATTTTGCTGGTTTTTGGAAACAGGGCCATGATTAAGAGGGATGGCTGGGGGCATTCAT 29081 Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 ||| || |||||||||||||||||| | ||| ||| || ||||| || Sbjct 29082 ATTGTGCTGCTAGAGGTGAAATTCTTGGACCAGTGCAAGCTGGCCTAGAGCAAAAGCATT 29141 Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| |||||||||||||||| |||| |||| Sbjct 29142 TGCCAAGAATGTTTTCATTAATCA-AGAACTAAAG 29175 >seq24876 Length=27914 Score = 78.8 bits (86), Expect = 2e-12 Identities = 122/172 (71%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 141 AATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGAT 200 |||||||| | ||||||||| ||||||||| || | | | ||||||||||| ||| Sbjct 22936 AATAGGAC-TCTGGTTCTATTATGTTGGTTTTCAGAAGCAGGGCCATGATTAATAGAGAT 22994 Query 201 AGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAA 260 || || | | | |||| ||| ||| ||||||||||||| | |||| Sbjct 22995 GGTTGGAAGCATTTGCATTCTGTTGCTAGAATTGAAATTCTTGGACCAACATAAGATGGC 23054 Query 261 CTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||| | |||||| || ||||| ||||| |||||||||| ||| |||||| Sbjct 23055 CTAGAGTGAAAGCATTTGCCAAGAATGTTCTCATTAATCA-AGAATGAAAGT 23105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914626178752