Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq11657 266 6e-69 seq48358 228 1e-57 seq33626 109 9e-22 seq13459 102 1e-19 seq24758 77.0 6e-12 >seq11657 Length=82924 Score = 266 bits (294), Expect = 6e-69 Identities = 219/263 (83%), Gaps = 3/263 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||| |||||| ||| |||||||||| ||| Sbjct 368 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACAGTCTAAGCCCCGCTCACGTTCTCTA 309 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||| ||||||||||||||||| || |||||||||||| |||||||||||||| || Sbjct 308 TTATTGGGTGAACAATCCAACAGTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCTGA 249 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| |||| ||||||| ||||||| |||||||| ||||||||| Sbjct 248 CATCGAAGGATCAAAAAGC-GCGTCACTATGAATGCTTGGCCGCCACAAGGCAGTTATCC 190 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||| ||||| |||||| | || ||| | | | |||||||| ||| Sbjct 189 CTGTGGTAACTCTTCTGACACCTCCTG-CTTAAAACCCAAAAAGCAGAAGGATCGTGAGG 131 Query 271 CCACACTTTCATGGTTTGTATTC 293 | | |||||||||| || |||| Sbjct 130 CTCCGCTTTCATGGTCTG-ATTC 109 >seq48358 Length=1008 Score = 228 bits (252), Expect = 1e-57 Identities = 173/204 (85%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||| | ||||||||||||||||||| |||| |||||||||| | | |||||| ||||||| Sbjct 427 TCACCGGTAGGGTAAAACTAACCTGCCTCACGACGGTCTAAGCGCGGCTCACTTTCCCTA 486 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 | ||||||||||||||||||||||| | |||||||||| |||| | || |||||| Sbjct 487 TCAGTGGGTGAACAATCCAACGCTTGGTGCATTCTGCTTCACAGTGATGGAAAAAGCCGA 546 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 || ||||||||||||||| ||| |||||||| ||||| | |||| ||||||||||| | Sbjct 547 CACTGAAGGATCAAAAAGCGGCGTTGCTATGAATGCTTGACGGCCATAAGCCAGTTATTC 606 Query 211 CTGTGGTAACTTTTCTGGCACCTC 234 ||||||||||||||||| |||||| Sbjct 607 CTGTGGTAACTTTTCTGACACCTC 630 >seq33626 Length=39364 Score = 109 bits (120), Expect = 9e-22 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||| ||||||||||| |||||||| || | ||||| ||||||| Sbjct 14275 TCATCAGTAGGGTAAAACCAACCTGTCTCACGACGGTCT-AAGAGAACTCACATTCCCTA 14217 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 ||||||||||||||||||| | | |||||||||||| Sbjct 14216 TTAGTGGGTGAACAATCCAGCAACTGGTGAATTCTGCTTC 14177 >seq13459 Length=33726 Score = 102 bits (112), Expect = 1e-19 Identities = 182/263 (69%), Gaps = 6/263 (2%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||| | |||||||||||||| ||||||| | | ||||||||||||||| |||| || Sbjct 23160 TCATCCGGAGGGTAAAACTAACTTGTCTCAAGGCAGTCTAAACCCAGCTCGTGTTCACTG 23101 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 | || |||||| |||| ||| |||||||| || | ||| ||| ||||| || Sbjct 23100 TCCATGTGTGAACTGAACAACACTTGGTGAATTCTGTTTTGTGGTGACAGGCAGAGCTGA 23041 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| |||| | ||| ||| | | | || | || |||||||||| ||| | Sbjct 23040 TATCAAAGG--CTTGAAGGAACTTTGAT---AATACCTGACTGCCACAAGGTGGTTTTAT 22986 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 |||| ||| ||||||| || |||| | | ||| | || | | | |||| ||| Sbjct 22985 CTGTCATAAATTTTCTGACATCTCTTACTTAAAACCTAGA-AAATCAGAAGATCCTGAGG 22927 Query 271 CCACACTTTCATGGTTTGTATTC 293 ||||||| ||||| | ||||| Sbjct 22926 CCACACTAGCATGGCCTATATTC 22904 >seq24758 Length=29021 Score = 77.0 bits (84), Expect = 6e-12 Identities = 60/72 (83%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||| |||||||||| |||| ||||| |||| | |||||||||||||||| |||| || Sbjct 16834 TCACCAGTAGGGTAGAACTGACCTGGCTCACAGCAGTCTAAACCCAGCTCATGTTCTCTG 16893 Query 91 TTAGTGGGTGAA 102 |||||||| ||| Sbjct 16894 TTAGTGGGGGAA 16905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853864299744