Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq261 466 6e-129 seq990 194 5e-47 seq1008 89.7 2e-15 >seq261 Length=4975901 Score = 466 bits (516), Expect = 6e-129 Identities = 281/296 (95%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| |||||| | | |||||||||||||||||| Sbjct 469248 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGCGCCAGACTAGAGTCAAGCTCAA 469307 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 469308 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 469367 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 | ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 469368 AGAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 469427 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 469428 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 469487 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532 |||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct 469488 TTGAATTTCTTCACTTAGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAAC 469543 >seq990 Length=9255702 Score = 194 bits (214), Expect = 5e-47 Identities = 155/187 (83%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 ||||||||||||||||| | ||| |||||| || |||||||||| ||||||||||| Sbjct 8014654 ACTTATTCTACACCTCTTATGTCTCTTCACAGCACCGAACTAGAGTCATGCTCAACAGGG 8014595 Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||||||||||| ||||||||| ||| || |||||||||||| || |||| || | |||| Sbjct 8014594 TCTTCTTTCCCTGCTGATTCCAGCAAACCTGTTCCCTTGGCTATGTTTTCACTGGTTAGT 8014535 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 | ||| |||||| ||||||| ||| || || |||||| | |||||||||||||||| || Sbjct 8014534 GGGTAGAGACAGTTGGAATCTTGTTCATTCAGTCATGCACATCACTAATTAGATGACAAG 8014475 Query 422 GCATTTG 428 | ||||| Sbjct 8014474 GTATTTG 8014468 >seq1008 Length=5495893 Score = 89.7 bits (98), Expect = 2e-15 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 18 CAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGAT 77 |||||| ||||||| |||| |||| | || ||||| |||||| | |||||| || |||| Sbjct 2886121 CAGGAGGTTTCTGTCCTCCCTGAGCTCACCCTAGGAGACCTGCCTCATGGTTCAATAGAT 2886180 Query 78 GTGCCGCCCCAGCCAAACTCCCCACCTGA 106 || || |||| |||| ||||||||||||| Sbjct 2886181 GTACCACCCCTGCCAGACTCCCCACCTGA 2886209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635104128224