Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq12 95.1 1e-14
seq431 89.7 4e-13
>seq12
Length=3827242
Score = 95.1 bits (104), Expect = 1e-14
Identities = 91/117 (78%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315
||| ||||||| ||||||||||| | | || || ||||||||||| ||||| ||||
Sbjct 3380755 TGGCACGTTTCAGTCAGGAGGTGCAGATCCCAGAAGCACGTTGTTTCTATGGCTTTCAGA 3380814
Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372
|| ||| ||||| || ||||| ||||||||||| | || || || || |||||||
Sbjct 3380815 TTCTCATTGAGAACGTTCACTCAGAGATGTACAGCCTGCTGATAGACACCTACATCA 3380871
>seq431
Length=331394
Score = 89.7 bits (98), Expect = 4e-13
Identities = 104/137 (76%), Gaps = 4/137 (3%)
Strand=Plus/Plus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
||| || |||||||| ||||||||||| | || || || | ||||| ||||| || |
Sbjct 63782 CATGAAGAGATCAGGAATCCAGAGGGCAAAAAAAAGGTCTCTGGCTCGCTGCTCTTCTTT 63841
Query 66400 GCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458
|| ||| || || ||||| || ||||||||||| || ||||||||| |||||||
Sbjct 63842 CCCAGTG-TTCTTCTTTAAGTCAAGAAACTCAAAGATATCCAAATGCCATGGCTCCAGGT 63900
Query 66459 AGATGGCGAACGAGCCC 66475
||||||| || |||||
Sbjct 63901 AGATGGCAAA--AGCCC 63915
Score = 86.0 bits (94), Expect = 5e-12
Identities = 135/188 (72%), Gaps = 4/188 (2%)
Strand=Plus/Plus
Query 65681 TCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATG 65740
|||||| ||| | |||||||||||||| |||||||| || | || || ||||||||
Sbjct 58857 TCGTACGGTCCTTGCTCCTTGGCAAGTTCACAGCTGGCTTCCAAAGCACCATAATAAATG 58916
Query 65741 GTCTCGAAAATGCG-TCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACC-CA 65798
||||| ||||| | | | | ||| | | |||||| || || | || |||| ||
Sbjct 58917 GTCTCAAAAATCTGCTGGTTCAAGCGC-TGGGCCTCAGGACTTTCAAAAGG-GTACCTCA 58974
Query 65799 TCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAAT 65858
||| | |||| || ||||| || || || ||||| || ||||||||||| || |
Sbjct 58975 TCAAAATGAAAGCATCTGCCAGGCCCTGCACACCAATGCCAATGGGACGATGGCGTCTGT 59034
Query 65859 TGGAACGT 65866
||||||||
Sbjct 59035 TGGAACGT 59042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397539591654320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |