Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq707 194 5e-47 seq180 98.7 3e-18 >seq707 Length=210377 Score = 194 bits (214), Expect = 5e-47 Identities = 155/187 (83%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 ||||||||||||||||| | ||| |||||| || |||||||||| ||||||||||| Sbjct 101033 ACTTATTCTACACCTCTTATGTCTCTTCACAGCACCGAACTAGAGTCATGCTCAACAGGG 100974 Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||||||||||| ||||||||| ||| || |||||||||||| || |||| || | |||| Sbjct 100973 TCTTCTTTCCCTGCTGATTCCAGCAAACCTGTTCCCTTGGCTATGTTTTCACTGGTTAGT 100914 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 | ||| |||||| ||||||| ||| || || |||||| | |||||||||||||||| || Sbjct 100913 GGGTAGAGACAGTTGGAATCTTGTTCATTCAGTCATGCACATCACTAATTAGATGACAAG 100854 Query 422 GCATTTG 428 | ||||| Sbjct 100853 GTATTTG 100847 >seq180 Length=14618622 Score = 98.7 bits (108), Expect = 3e-18 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 13 CTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAA 72 ||| ||||||| ||||||| |||| ||||| | |||||||| |||||| | |||||| || Sbjct 9750739 CTCCACAGGAGGTTTCTGTCCTCCCTGAGTTCACCTTAGGAGACCTGCCTCATGGTTCAA 9750798 Query 73 CAGATGTGCCGCCCCAGCCAAACTCCCCACCTGA 106 || ||| || |||| |||| ||||||||||||| Sbjct 9750799 TAGGTGTACCACCCCTGCCAGACTCCCCACCTGA 9750832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635085192608