Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq319 95.1 1e-14 seq213 93.3 3e-14 >seq319 Length=11147124 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 ||| ||||||| ||||||||||| | | || || ||||||||||| ||||| |||| Sbjct 5775779 TGGCACGTTTCAGTCAGGAGGTGCAGATCCCAGAAGCACGTTGTTTCTATGGCTTTCAGA 5775838 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 || ||| ||||| || ||||| ||||||||||| | || || || || ||||||| Sbjct 5775839 TTCTCATTGAGAACGTTCACTCAGAGATGTACAGCCTGCTGATAGACACCTACATCA 5775895 >seq213 Length=2372662 Score = 93.3 bits (102), Expect = 3e-14 Identities = 105/137 (77%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || |||||||| ||||||||||| |||| || || | ||||| ||||| || | Sbjct 2158612 CATGAAGAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCTCTGGCTCGCTGCTCTTCTTT 2158553 Query 66400 GCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458 || ||| || || ||||| || ||||||||||| || ||||||||| ||||||| Sbjct 2158552 CCCAGTG-TTCTTCTTTAAGTCAAGAAACTCAAAGATATCCAAATGCCATGGCTCCAGGT 2158494 Query 66459 AGATGGCGAACGAGCCC 66475 ||||||| || ||||| Sbjct 2158493 AGATGGCAAA--AGCCC 2158479 Score = 86.0 bits (94), Expect = 5e-12 Identities = 135/188 (72%), Gaps = 4/188 (2%) Strand=Plus/Minus Query 65681 TCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATG 65740 |||||| ||| | |||||||||||||| |||||||| || | || || |||||||| Sbjct 2163539 TCGTACGGTCCTTGCTCCTTGGCAAGTTCACAGCTGGCTTCCAAAGCACCATAATAAATG 2163480 Query 65741 GTCTCGAAAATGCG-TCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACC-CA 65798 ||||| ||||| | | | | ||| | | |||||| || || | || |||| || Sbjct 2163479 GTCTCAAAAATCTGCTGGTTCAAGCGC-TGGGCCTCAGGACTTTCAAAAGG-GTACCTCA 2163422 Query 65799 TCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAAT 65858 ||| | |||| || ||||| || || || ||||| || ||||||||||| || | Sbjct 2163421 TCAAAATGAAAGCATCTGCCAGGCCCTGCACACCAATGCCAATGGGACGATGGCGTCTGT 2163362 Query 65859 TGGAACGT 65866 |||||||| Sbjct 2163361 TGGAACGT 2163354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397533980727440