Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq578 98.7 4e-15 >seq578 Length=225006 Score = 98.7 bits (108), Expect = 4e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 |||||| || | ||| | ||||||||| ||||||||||||| ||| || || ||||||| Sbjct 147161 CTCCTTCAGGCGGGGGACGCCCAGGGTGACGTTCTTGGCCGAGACCCCCGCGTAGTGGAA 147220 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | |||||||| ||| ||| || || || | |||||| |||| || || || Sbjct 147221 GGTGTTGAGGGTCATCTGGGTGGCCGGTTCCCCCAGCCACTGGGCCGCCAGTGCCCCCAC 147280 Query 349204 CATCTCGCCGGG 349215 |||||| ||||| Sbjct 147281 CATCTCCCCGGG 147292 Score = 86.0 bits (94), Expect = 3e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 |||||| || | ||| | ||||||||| ||||||||||||| ||| || || ||||||| Sbjct 146977 CTCCTTCAGGCGGGGGACGCCCAGGGTGACGTTCTTGGCCGAGACCCCCGCGTAGTGGAA 147036 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCC 349188 ||| | |||||||| ||| ||| || || || | |||||||| Sbjct 147037 GGTGTTGAGGGTCATCTGGGTGGCCGGTTCCCCCAGCCACTGGCC 147081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084547089979758