Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficedula_20albicollis_20[refseq_20GCF_5F000247815.1_202013-06-27] 21,428 sequences; 1,118,343,587 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2381 286 1e-74 >seq2381 Length=2156 Score = 286 bits (316), Expect = 1e-74 Identities = 189/206 (92%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 303 TTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTA--GCATGTATTAGCTCTA 359 |||||||||||||||||||||| || |||||||||| ||| | |||||||||||||||| Sbjct 1 TTTATCTAATAAATACACCCCTCCCAGAAGTCGGGGCTTTGATTGCATGTATTAGCTCTA 60 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 |||||||||| ||||||||||||| ||| || ||||||||||| ||||||||||||||| Sbjct 61 GAATTACCACAGTTATCCATGTAGCAAGATATCATCAAATAAACTATAACTGATTTAATG 120 Query 420 AGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATCTT 478 |||||||||||||||||| ||| | | ||| ||||||||||||||||||||||||||||| Sbjct 121 AGCCATTCGCAGTTTCACAGTACAAACTTGTTTATACTTAGACATGCATGGCTTAATCTT 180 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 181 TGAGACAAGCATATGACTACTGGCAG 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510076351488