Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficedula_20albicollis_20[refseq_20GCF_5F000247815.1_202013-06-27] 21,428 sequences; 1,118,343,587 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq223 122 4e-22 >seq223 Length=52600 Score = 122 bits (134), Expect = 4e-22 Identities = 106/132 (80%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | ||||| ||||||||| ||||||||||||| ||||||||| ||||||| Sbjct 9011 CTCCTTGAGGCGGGGCACGCCCAGGGTGACGTTCTTGGCCGAGACGCCGGCGTAGTGGAA 8952 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | |||||||| ||| ||| |||||||| | | |||| | || || ||| || Sbjct 8951 GGTGTTGAGGGTCATCTGGGTGGCCGGCTCGCCCAGGGACTGCGCGGCCAGCGCGCCCAC 8892 Query 349204 CATCTCGCCGGG 349215 |||||| ||||| Sbjct 8891 CATCTCCCCGGG 8880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084152882735544