Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fulmarus_20glacialis_20[refseq_20GCF_5F000690835.1_202014-05-13] 57,389 sequences; 1,141,395,646 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq27881 111 3e-22 seq2266 95.1 2e-17 >seq27881 Length=38823 Score = 111 bits (122), Expect = 3e-22 Identities = 158/217 (73%), Gaps = 14/217 (6%) Strand=Plus/Plus Query 48 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCAT-TGGCTGGAAGCCAATAGTCCC 106 ||||||||||||| |||||| |||| || | || ||| | || | | |||| | ||||| Sbjct 20048 AAGGGCATCACAGGCCTGTTGTTGC-TCTATCT--CATGTTGCCGAATGCCACTTGTCCC 20104 Query 107 TCTAAGAAGCCAGCCACCAACCAT-----AGTCGATGGGGCTATTTAGCAGGTTAAGGTC 161 | |||||| | | | |||| |||| | |||| || || | | ||| Sbjct 20105 TTGAAGAAGTTGGACGTCGACCACTGGGGAGTC-ACATAACTATATAACATGCCAGAGTC 20163 Query 162 TCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACC 221 | ||| ||||| ||| ||||| ||||||||||||||||||| ||| ||| | ||||| Sbjct 20164 TTGTTTGTTATTGGATTTAACTAGACAAATCACTCCACCAA----GAATGGCAAGGCACC 20219 Query 222 ACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||| |||| ||||||| || |||||||||| Sbjct 20220 ACCACCCATGGAATTGAGAAAGACCTCTCAATCTGTC 20256 >seq2266 Length=10242 Score = 95.1 bits (104), Expect = 2e-17 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 ||||||||||| ||||| |||||||||||||||||| |||||||||||||||| ||||| Sbjct 4075 CTCCACCAACTGAGAACAGCCATGCACCACCACCCACGGAATCAAGAAAGAGCTCTCAAT 4134 Query 254 CTGTC 258 ||||| Sbjct 4135 CTGTC 4139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796357014309