Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fulmarus_20glacialis_20[refseq_20GCF_5F000690835.1_202014-05-13] 57,389 sequences; 1,141,395,646 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq35780 123 2e-23 seq10457 91.5 1e-13 seq29343 87.8 1e-12 >seq35780 Length=25771 Score = 123 bits (136), Expect = 2e-23 Identities = 126/161 (78%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 |||||||| || ||||| || |||||||| |||| ||||| ||||| ||||| ||| Sbjct 15467 GTATACTCCACTATTTCTGTACACAGATTGCTGCTTTTGATGGTCCCCAAGTTCTGCTGA 15526 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || ||||| || ||||| | || ||||||| ||||||||| ||||||||||| || Sbjct 15527 TTGCTCTTCCGGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCGGTCTCTGTCTGA 15586 Query 66170 GACTCAATGATGGCGTGCCAAAGAGC-GC-GTGCCTTCACC 66208 || |||||||| |||| || ||||| || | ||||||||| Sbjct 15587 GATTCAATGATAGCGTACC--AGAGCTGCTGGGCCTTCACC 15625 Score = 98.7 bits (108), Expect = 8e-16 Identities = 106/137 (77%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || |||||||| ||||||||||| |||| || || | ||||| ||||| || | Sbjct 16815 CATGAAGAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCTCTGGCTCGCTGCTCTTCCTT 16874 Query 66400 GCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458 || ||| || || ||||| || |||||||||||||| ||||||||| ||||||| Sbjct 16875 TCCAGTG-TTCTTCTTTAAGTCAAGAAACTCAAAGATGTCCAAATGCCATGGCTCCAGGT 16933 Query 66459 AGATGGCGAACGAGCCC 66475 ||||||| || ||||| Sbjct 16934 AGATGGCAAA--AGCCC 16948 >seq10457 Length=264043 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| | | || || ||||||||||| ||||| |||||| ||| ||||| Sbjct 6783 CAGGAGGTGCAGATCCCAGAAGCTCGTTGTTTCTATGGCTTTCAGATTCTCATTGAGAAC 6842 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 || ||||| ||||||||||| | ||||| || || ||||||| Sbjct 6843 GTTCACTCAGAGATGTACAGCTTGCTCATAGACACCTACATCA 6885 >seq29343 Length=28090 Score = 87.8 bits (96), Expect = 1e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 || || || ||| | | || || ||||||||||| |||||||||||||||||||| ||| Sbjct 27410 CAAGAAGTACAAATCACAGAAGCTCGTTGTTTCTATGGCTTCCAGATTGCCATGGAAAAT 27351 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 | || || || ||||||||| |||| || || || ||||| Sbjct 27350 ATACATTCAGAAATGTACAGTCTTCTTATTGACACCTACAT 27310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397289929634960