Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq315876 165 1e-38 >seq315876 Length=216 Score = 165 bits (182), Expect = 1e-38 Identities = 171/219 (78%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 8 GGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTG 67 |||||||||| || ||||||||||||| ||||| ||||||||| |||||| ||||||| Sbjct 1 GGGCAGGGACTTAATCAACGCGAGCTT-ATGACCGGCGCTTACTGGGAATT-CCTCGTTC 58 Query 68 AAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGA 126 | | || ||||||||| | ||||||||||||| ||||| | ||||||| Sbjct 59 ACGGGGAAGAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCG 118 Query 127 CCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGA 186 |||| |||| ||| | || | ||| ||||||||||||||||||||||| | Sbjct 119 CCTGCCGGCGGAGGGTAGGCACAAGCTGAGCCAGTCAGTGTAGCGCGCGTGCGGCCCCGG 178 Query 187 ACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||||||||||||||||||||||||||| ||||| || Sbjct 179 ACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 746400166200