Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09]
768,680 sequences; 1,114,530,436 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq690916 120 6e-25
seq249163 107 3e-21
seq339850 73.4 7e-11
>seq690916
Length=81
Score = 120 bits (132), Expect = 6e-25
Identities = 75/81 (93%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 109 CTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG 168
|| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1 CTATGCCCGAATACATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGG 60
Query 169 TTTCTAGGACCGCCGTAATGA 189
||||||| |||||||||||
Sbjct 61 TTTCTAGAGTCGCCGTAATGA 81
>seq249163
Length=258
Score = 107 bits (118), Expect = 3e-21
Identities = 129/173 (75%), Gaps = 2/173 (1%)
Strand=Plus/Minus
Query 140 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGA 199
||||||||| | |||||||||||||||||||| | | || | |||||||| |||||
Sbjct 257 GAATAGGAC-TCCGGTTCTATTTTGTTGGTTTTCGGAAACGGGGCCATGATTAAGAGGGA 199
Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259
| |||||| | ||||| | |||||||||||||||||| |||||
Sbjct 198 CGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGG 139
Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
||| |||||||| || ||||| |||||||||||||||| ||||||||||
Sbjct 138 CCTAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 87
>seq339850
Length=171
Score = 73.4 bits (80), Expect = 7e-11
Identities = 60/72 (83%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | | |||||||||| |||||||||||||
Sbjct 66 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAGAAAATTAGAGTGT 125
Query 98 TCAAAGCAGGCC 109
||||||||||||
Sbjct 126 TCAAAGCAGGCC 137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 908165040640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |